Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score =  108 bits (269), Expect = 2e-28
 Identities = 74/221 (33%), Positives = 113/221 (51%), Gaps = 23/221 (10%)

Query: 14  IDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWAR-LVDYCPDVK------VVHRLDMS 66
           +D++YEDEH++  NKP+GL+  P     H D      L++Y P+V+      +VHRLD  
Sbjct: 85  LDIVYEDEHLLVINKPAGLVVHPA--AGHADGTLVNALLNYAPEVENLPRAGIVHRLDKD 142

Query: 67  TSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQK 126
           TSG+++ A+     ++L  Q Q R   + Y A V G +      V+ P+    P   K+ 
Sbjct: 143 TSGIMVVARSLIAHTSLVDQLQTRTMGREYEAVVVGTLTGG-ATVDAPIGRH-PRERKKM 200

Query: 127 VCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAP---- 182
                G+ ++T Y++V+R    T VR    +GR+HQ+RVHM  + HP+VGD LY      
Sbjct: 201 AVVASGKPAVTHYRLVERFAAHTHVRCKLESGRTHQIRVHMAHVKHPLVGDPLYGGRLRL 260

Query: 183 --------PEAVEFADRLQLHAAELCFYHPRSHWLRTLFVP 215
                    EA+   +R  LHA +L   HP +  + T  VP
Sbjct: 261 PKGTTDELREALSTFNRQALHARQLTLEHPETGEILTWEVP 301