Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase from Klebsiella michiganensis M5al

 Score = 95.9 bits (237), Expect = 9e-25
 Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 19/215 (8%)

Query: 9   PKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDY-----CPDVKVVHRL 63
           P+D  ++++YED+ I+  NKP  L+  PG        + A L  Y      P   +VHRL
Sbjct: 79  PQDIPLNIVYEDDDILVINKPRDLVVHPGAGNPDGTVLNALLHYYPAIADVPRAGIVHRL 138

Query: 64  DMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRP 123
           D  T+GL++ AK    ++ L +  Q R   + Y A   G M    G V  P+    P + 
Sbjct: 139 DKDTTGLMVVAKTIPAQTRLVESLQLREITREYEAVAIGHMTAG-GTVEEPISRH-PTKR 196

Query: 124 KQKVCFEEGRDSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYA-- 181
                   G+ ++T Y++++     T +RL   TGR+HQ+RVHM  + HP+VGD +Y   
Sbjct: 197 THMAVHPMGKPAVTHYRIMEHFRIHTRLRLRLETGRTHQIRVHMAHITHPLVGDQVYGGR 256

Query: 182 --PPE--------AVEFADRLQLHAAELCFYHPRS 206
             PP+        A+   DR  LHA  L  YHP S
Sbjct: 257 PRPPKGASEEFITALRKFDRQALHATMLRLYHPIS 291