Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., RNA pseudouridine synthase from Klebsiella michiganensis M5al

 Score =  158 bits (399), Expect = 1e-43
 Identities = 89/218 (40%), Positives = 125/218 (57%), Gaps = 7/218 (3%)

Query: 8   PPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVVHRLDMST 67
           PP    ID++Y+DEH++  +KP+GLLS+ G+   + DS+  RLV   P   + HRLD  T
Sbjct: 11  PPCHAEIDILYQDEHLLLIDKPAGLLSLSGKNPRNLDSVHYRLVQQFPGCALAHRLDFGT 70

Query: 68  SGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKV 127
           SGL++ A+ K + +AL +QF  R   K+Y A + G +  +EG ++ P+  D    P   +
Sbjct: 71  SGLMVIARNKVINAALCQQFSQRAVSKVYSALLCGHLADDEGTIDAPIAKDPALFPLMTI 130

Query: 128 CFEEGRDSLTRYQVVKR-----EEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAP 182
           C   G+ + + Y+VV+R         T V+L P TGR+HQLR+H Q LGHPI+G DLY  
Sbjct: 131 CPRRGKPARSGYRVVERLRYQDSVPVTRVQLTPETGRTHQLRIHCQQLGHPILGCDLYGG 190

Query: 183 --PEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDF 218
                 E A RL LHA+EL F HP S        PC F
Sbjct: 191 LLLPGTEQAPRLMLHASELHFMHPVSGERIDAISPCGF 228