Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score =  108 bits (270), Expect = 1e-28
 Identities = 77/209 (36%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 16  VIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWAR-LVDYCPDVKVVHRLDMSTSGLILFA 74
           ++YED+HI+  NKPSG     G  +        R L      +++VHRLD  TSG++L A
Sbjct: 109 ILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVA 168

Query: 75  KGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWPNRPKQKVCF-EEGR 133
           K +    +L +Q + +   K Y A V G  + +   V  PL  +     ++ V   +EG+
Sbjct: 169 KKRSALRSLHEQLRDKGMQKDYLALVRGQWQSHTKVVQAPLLKNILQSGERIVRVNQEGK 228

Query: 134 DSLTRYQVVKREEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDLYAPPE-----AVEF 188
            S TR++V +R    T+VR  P+TGR+HQ+RVH Q  GHPI  DD Y   E     A   
Sbjct: 229 PSETRFKVEERFTHATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDKQLAGTG 288

Query: 189 ADRLQLHAAELCFYHPRSHWLRTLFVPCD 217
            +RL LHAA L F HP S  +  +  P D
Sbjct: 289 LNRLFLHAAALKFTHPGSGEIMRVEAPLD 317