Pairwise Alignments

Query, 245 a.a., RNA pseudouridine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., Dual-specificity RNA pseudouridine synthase RluA from Enterobacter sp. TBS_079

 Score =  241 bits (616), Expect = 7e-69
 Identities = 123/219 (56%), Positives = 149/219 (68%), Gaps = 1/219 (0%)

Query: 1   MAMTEYNPPKDPWIDVIYEDEHIIAANKPSGLLSVPGRPVEHYDSMWARLVDYCPDVKVV 60
           M M  YNPP+DPW+ V+Y+DEHI+  NKPSGLLSVPGR  EH DS+  R+    P  + V
Sbjct: 1   MVMEPYNPPQDPWLVVLYQDEHIMVVNKPSGLLSVPGRLDEHKDSVMTRIQRDYPQAESV 60

Query: 61  HRLDMSTSGLILFAKGKHMESALKKQFQYRLTHKIYYARVWGVMEQNEGEVNLPLCCDWP 120
           HRLDM+TSG+I+ A  K  E  LK+QF+ R   K Y ARVWG  +  EG V+LPL CDWP
Sbjct: 61  HRLDMATSGVIVVALNKAAERELKRQFRDREPKKQYVARVWGHPQPAEGLVDLPLICDWP 120

Query: 121 NRPKQKVCFEEGRDSLTRYQVVK-REEKTTVVRLIPITGRSHQLRVHMQSLGHPIVGDDL 179
           NRPKQKVC+E G+ + T Y+V++   + T  V L PITGRSHQLRVHM +LGHPI+GD  
Sbjct: 121 NRPKQKVCYETGKAAQTEYEVLEYAPDNTARVLLKPITGRSHQLRVHMLALGHPILGDRF 180

Query: 180 YAPPEAVEFADRLQLHAAELCFYHPRSHWLRTLFVPCDF 218
           YAPP+A+  A RLQLHA  L   HP      T   P DF
Sbjct: 181 YAPPDALALAPRLQLHAQTLTITHPVFGNAMTFKAPVDF 219