Pairwise Alignments

Query, 325 a.a., lactate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., D-3-phosphoglycerate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (355), Expect = 3e-38
 Identities = 94/253 (37%), Positives = 134/253 (52%), Gaps = 10/253 (3%)

Query: 54  IVITNKVVLTREMLIQLPKLKLIAISATGTNNVDLPACRDLNIAVCNVQGYATRSVPEHV 113
           I I ++  L+ ++L +  KL  I     GTN VDL     L I V N     TRSV E V
Sbjct: 57  IGIRSRTQLSADVLKRAEKLIAIGCFCIGTNQVDLATAESLGIPVFNAPFSNTRSVAELV 116

Query: 114 VAMMFALRRNLIGYHNDIAAGEWQRHKQFCFFTHPIGDIAGSTMGIIGSGALGQATANLA 173
           +  +  L R +   +     G W +     +      ++ G T+G+IG G +G     LA
Sbjct: 117 LGEIIMLMRGIPERNAIAHRGGWMKTAAGSY------EVRGKTLGVIGYGHIGTQLGILA 170

Query: 174 RALGMHVLLAERKGQVECRDGYT--SFEQVLAQSDVLSLHCPLTDETRNIISEAELAQMN 231
             LGM V+  + + ++   +     S EQ+LAQ+DV+SLH P T +T+++IS AE A M 
Sbjct: 171 ETLGMRVVFFDIEDKLPLGNAQQIHSMEQLLAQADVVSLHVPETPQTKDMISTAEFAAMR 230

Query: 232 PNALLINTGRGGLVDEQALVDALKRRQIAGAGVDVFSAEPADMDNPLIAN-RDLPNLLLT 290
             ++ IN  RG +VD  AL  ALK R +AGA +DVF  EP   D+  I+  R L N+LLT
Sbjct: 231 KGSIFINASRGTVVDIDALTVALKERHLAGAAIDVFPVEPQSNDDEFISPLRGLDNVLLT 290

Query: 291 PHVAWGSDSSIQQ 303
           PHV  GS +  Q+
Sbjct: 291 PHVG-GSTAEAQE 302