Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 943 a.a., isoleucyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  132 bits (333), Expect = 8e-35
 Identities = 199/914 (21%), Positives = 336/914 (36%), Gaps = 172/914 (18%)

Query: 13  DLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRMKGKN 72
           DLY+   + G  +P        + +   PP   G++H+GHA    I D ++R + + G +
Sbjct: 36  DLYRKLRQIGEGRPK-------FVLHDGPPYANGNIHIGHAVNKVIKDMIVRSRTLSGFD 88

Query: 73  TLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRL 132
             +  G D  G+     +E K+    GK +     D   ++   + AE          RL
Sbjct: 89  APYVPGWDCHGLP----IEHKVETTFGKNQP---ADLTRERCRAYAAEQIEGQKADFIRL 141

Query: 133 GASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLEVENKE 192
           G   DWD    TMD            +L +   +++G + VNW     +A+++ EVE ++
Sbjct: 142 GVLGDWDNPYKTMDFANEAGEIRALAKLVEGGFVFKGLKPVNWCFDCGSALAEAEVEYQD 201

Query: 193 TKGHMWHFRYPLADGVKTADGKDY--------IVVATTRPETMLGDTGVAVNPEDPRYKD 244
            K       + + D  K A             IV+ TT P T+  +  + V+PE      
Sbjct: 202 KKSDAIDVAFEVEDADKLAAAFGLPNLAKPASIVIWTTTPWTIPANQALNVHPEFVYALV 261

Query: 245 LIGKEIIL-----------------------------------PIVGRRIPIVGDEHADM 269
             G+ ++L                                   P   R  P+   ++ + 
Sbjct: 262 DTGERLLLLAEELVESCLQRYGLAGEIIARCEGKALELIRFRHPFYERFAPVYLADYVET 321

Query: 270 EKGTGCVKITPAHDFNDYEVGKRHQLPMINILTFDANIRDAAEVFNSNGEASNAYGTEIP 329
             GTG V   PA+  +D+   K + +   +IL              SNG     Y +++P
Sbjct: 322 GAGTGIVHSAPAYGEDDFRSCKHYGMENDDILG----------PVQSNG----VYVSDLP 367

Query: 330 AKYQGMERFAARKAIVAEFEELGLLQEIKDHDLTVPYGDRGGVVIEPMLTDQWYVR---- 385
             + G   + A  AIV +  E+G L + +    +  +  R    +    T QW+V     
Sbjct: 368 F-FGGQFIWKANPAIVEKLAEVGALLKHESIQHSYMHCWRHKTPLIYRATAQWFVGMDKV 426

Query: 386 ---AGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEQ 442
                 L + A++A+E    +FVP   +      +    DWCISRQ  WG  IP +  ++
Sbjct: 427 AHDGSSLRRRALDAIEQ--TEFVPAWGQARLHGMIAGRPDWCISRQRTWGVPIPFFLHKE 484

Query: 443 GNVFVGRNEE------------EVRAENNIAADVALRQD-------DDVLDTWFSSALWT 483
                 R  E             + A + + A   L ++        D LD WF S    
Sbjct: 485 SGELHPRTVELMEQVAQRVEQGGIEAWSKLDAAELLGEEAAQYEKITDTLDVWFDS---- 540

Query: 484 FGTLGWPEKTPELKVFHPT----DVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFK 539
            GT  W        + H +    D+ + G D    W    ++         DG A  P+K
Sbjct: 541 -GTTHWHVMRGSHPMGHESGPRADLYLEGSDQHRGWFHSSLLTGAAI----DGHA--PYK 593

Query: 540 TVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTR 599
            +   G   DENG KMSKS GNV+ P ++ D +                           
Sbjct: 594 GLLTHGFTVDENGRKMSKSLGNVIAPQEITDSM--------------------------- 626

Query: 600 KTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQ 659
                     G D LR  ++A   +G ++    + L+   +   ++ N +R++L N +  
Sbjct: 627 ----------GADILRLWVSATDYSG-EMAVSKQILQRSADAYRRIRNTARFLLSNLDGF 675

Query: 660 DCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLE 719
           D         +    D+W   +  L  +E       +R       ++ F   +   +YL+
Sbjct: 676 DPAQHMLPNDQLIALDRWAIDRALLLQQEIEEAYTTYRFWNVYQKVHNFCVQELGGFYLD 735

Query: 720 LTKPVLWK--GTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDT 777
           + K   +        +R+ +  L  + E  +R   P++ +  E IWQ     + G   ++
Sbjct: 736 IIKDRQYTTGADSLPRRSCQTALYHIAEALVRWIAPILAFTAEEIWQ----YLPGERNES 791

Query: 778 IMLQA-------LPQYDVANFNQEALDDIEWVKAFIT-SIRNLRAEYDINPGKPLEVMLK 829
           +ML         LPQ   A  ++   D +  VK  +   + N RA   I      EV L 
Sbjct: 792 VMLNTWYTGLTELPQ--DAELDRAFWDKVMAVKTAVNKELENQRAAKTIGGNLQAEVTLY 849

Query: 830 AANEQDAARIEANK 843
           A   +DA   E  K
Sbjct: 850 A---EDALAAELAK 860