Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 944 a.a., valyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score = 1217 bits (3148), Expect = 0.0
 Identities = 592/955 (61%), Positives = 726/955 (76%), Gaps = 13/955 (1%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           M+KTY P +IE   Y+TWE   YF P G  S + Y+IMIPPPNVTGSLHMGH F + IMD
Sbjct: 1   MDKTYQPHAIETSWYQTWESNNYFAPKG--SGEPYTIMIPPPNVTGSLHMGHGFNNAIMD 58

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
            LIR +RM+G+NTLWQ GTDHAGIATQMVVER++ A+ G ++HD GR+ F++K+W+WK E
Sbjct: 59  ALIRWRRMQGRNTLWQPGTDHAGIATQMVVERQLGAQ-GVSRHDLGREKFLEKVWQWKEE 117

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
           SGGTIT+Q+RRLG+SVDW RERFTMDDG  +AV+E FVRL++D LIYRGKRLVNWD KLH
Sbjct: 118 SGGTITRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLH 177

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TAISDLEVEN + KG++WH RYPLADG KTADG DY+VVATTRPETMLGD  +AV+PED 
Sbjct: 178 TAISDLEVENHDEKGYLWHLRYPLADGCKTADGLDYLVVATTRPETMLGDAAIAVHPEDE 237

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           RYK LIG+ ++LP+V R IPIV D++ D+E GTGCVKITPAHDFNDYEVGKRH LP+INI
Sbjct: 238 RYKSLIGRHVMLPLVNRLIPIVADDYVDLEFGTGCVKITPAHDFNDYEVGKRHHLPLINI 297

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
              +A +   A+VFN +G  ++     +P  Y  M+RF ARKAIVAEFE + LL++I DH
Sbjct: 298 FDQNACVLARAQVFNIDGSVNDKLDGSLPDGYAHMDRFDARKAIVAEFEAMSLLEKIDDH 357

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
            L VP GDR G +IEP LTDQWYV    LA+ A+ AVE+G+I+FVPKQYENMYFSWMRDI
Sbjct: 358 ALKVPRGDRSGTIIEPWLTDQWYVSTKPLAEKAIAAVESGEIEFVPKQYENMYFSWMRDI 417

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSA 480
           QDWCISRQLWWGHRIPAWYDE GNV+VGR+E EVR++ N+  +V LRQD+DVLDTWFSS 
Sbjct: 418 QDWCISRQLWWGHRIPAWYDEAGNVYVGRDEVEVRSKYNLCNNVELRQDEDVLDTWFSSG 477

Query: 481 LWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKT 540
           LWTF TLGWP++T  LK FHPTDVLVTGFDIIFFWVARMIM++ H         Q+PFKT
Sbjct: 478 LWTFSTLGWPQQTDFLKTFHPTDVLVTGFDIIFFWVARMIMLSTHL------TGQIPFKT 531

Query: 541 VYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRK 600
           VYV GL+RD  G KMSKSKGNVLDP+D++DGI L+ L+ KRT  MMQP+LA KI K TR 
Sbjct: 532 VYVHGLVRDGQGQKMSKSKGNVLDPLDIVDGITLDELLTKRTSGMMQPKLAEKIAKQTRA 591

Query: 601 TFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQD 660
            F  GI +YGTD+LRFT  ++ASTGRDI +DM R+EGYRNFCNK+WNA+ +V  NTE +D
Sbjct: 592 EFPEGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAANFVFENTEGKD 651

Query: 661 CGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLEL 720
            G A    +E S  D+WI S  +    E    ++ FR D+AA  LYEFIW+++C WYLEL
Sbjct: 652 TG-ANDEPVELSSVDRWIISALQRTEAEVTRQLEAFRFDLAAQALYEFIWDEYCAWYLEL 710

Query: 721 TKPVLWKGTEA--QQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTI 778
            KP+LW  T +  +QR TRR L+ VLE  LRLAHP +P+ITE IWQ V PL  G  G T+
Sbjct: 711 VKPLLWDETASAERQRGTRRALVRVLETALRLAHPFMPFITEEIWQRVAPLA-GKSGPTL 769

Query: 779 MLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAAR 838
           MLQ  P+++    ++ A  DIEWVKAF+  IR +R E +I+  K ++V+L  A+ +D  R
Sbjct: 770 MLQPWPEFNPERIDEAAEGDIEWVKAFMLGIRQIRGEMNISMAKRIDVVLGNASAEDQRR 829

Query: 839 IEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLAKEI 898
           +  N+P+L  LAKLES+R+L  GE  P  A ALVG  ++++PMAGLIDKDAEL RL KEI
Sbjct: 830 LADNEPLLKKLAKLESVRLLGAGEEAPLSAIALVGDMQVLVPMAGLIDKDAELARLDKEI 889

Query: 899 AKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLEQQKATIAAL 953
           A+  GE+ R+ GKL N GFV KAP  VI KER KLA  ++A  +L++Q+  IA L
Sbjct: 890 ARLDGEVKRVGGKLSNAGFVDKAPAEVIDKERAKLAEAEQAKARLQEQRDRIATL 944