Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., Isoleucyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  133 bits (334), Expect = 6e-35
 Identities = 195/888 (21%), Positives = 323/888 (36%), Gaps = 175/888 (19%)

Query: 11  EQDLYKTWEEQGYFKPHGDTSKDAYSIMIP--PPNVTGSLHMGHAFQDTIMDTLIRCQRM 68
           E  +   WE+   +    + SK     ++   PP   G LH GHA    + D + R Q+M
Sbjct: 26  EPGILARWEKLDIYARLRERSKGREQFVLHDGPPYANGHLHNGHALNKILKDVITRSQQM 85

Query: 69  KGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQ 128
            GK+  +  G D  G+  +  +E +  A +G+ K +     F  +  ++  E      ++
Sbjct: 86  LGKDANYVPGWDCHGLPIEWKIEERYRA-QGRRKDEIDVIEFRRECRQFAEEWIAIQREE 144

Query: 129 LRRLGASVDWDRERFTMD-DGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAISDLE 187
            +RLG + DW R   TM      + V+E+   L   DL Y+G + V W     TA++D E
Sbjct: 145 FKRLGITGDWKRPYTTMAFAAEAQIVRELGKFLMAGDL-YKGAKPVLWSVVEKTALADAE 203

Query: 188 VENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNP---------- 237
           VE ++        R+P+     TA     +V+ TT P TM G+  VA  P          
Sbjct: 204 VEYQDHTSTTIWIRFPVIRTPVTALEGASVVIWTTTPWTMPGNRAVAYGPGMDYVVFRVT 263

Query: 238 ------------------------------------EDPRYKDLIGKEIILPIVGR---- 257
                                                  +  DL G     P  G+    
Sbjct: 264 ATAEGSLARAGERIAVCADLLDDVLKQAKITEIEEIAHVKGADLAGTVCRHPWAGKGYDF 323

Query: 258 RIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINILTFDANIRDAAEVFNSN 317
            +P++       E+GTG V + P H  +DY             L     I     V    
Sbjct: 324 EVPLLSGLFVTTEQGTGFVHMAPGHGEDDY------------FLCLANGIAPPDTV---- 367

Query: 318 GEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDHDLTVPYGDRGGVVIEPM 377
            +    Y   +P  + G   F     IVA   + G L        + P+  R    +   
Sbjct: 368 -DGDGLYMDHVPG-FAGKHVFKVAPDIVAAMIDAGALLAQGSLTHSYPHSWRSKAPLIFR 425

Query: 378 LTDQWYV--RAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRI 435
            T QW++      L   A+ A++  + ++VP Q  N   + +    DWC+SRQ  WG  I
Sbjct: 426 NTPQWFISMEKNGLRDKALAAID--ETRWVPPQGRNRIRAMIESRPDWCVSRQRSWGVPI 483

Query: 436 PAWYDEQGNV-----------------------FVGRNEEEVRAENNIAADVALRQDDDV 472
             + D++  +                       F G     + AE++      +R   D+
Sbjct: 484 AIFVDKRDGLPLRDAAVTERIAQAFGAEGADAWFTGDPRRFLGAEHDPENFEPVR---DI 540

Query: 473 LDTWFSSALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDG 532
           ++ WF S       L   E   +LK   P D+ + G D    W    ++ +         
Sbjct: 541 VEVWFDSGSTHAFVL---EARDDLK--WPADLYLEGSDQHRGWFHTSLLESC------GT 589

Query: 533 KAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAA 592
           + + P+  V   G + DE GDK+SKSKGN   P  ++  +                    
Sbjct: 590 RGRAPYDAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSV-------------------- 629

Query: 593 KIEKNTRKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYV 652
                            G D +R  + +   TG DI +  + L+   +   +L N  R++
Sbjct: 630 -----------------GADIMRLWVVSSDYTG-DIRFGPEILKQTTDTYRRLRNTLRFL 671

Query: 653 L-----MNTEEQDCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYE 707
           L      +  E+    AA  ELE     +W+  +      +  G  D F        L+ 
Sbjct: 672 LGALAGFDKAERIDDIAAMPELE-----RWVLHRLSEIDVKVRGCCDAFSFHEMFQELHG 726

Query: 708 FIWNQFCDWYLELTKPVLW--KGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQS 765
           F       +YL++ K  L+       ++RA R  + TV +  ++   P + +  E  W +
Sbjct: 727 FCAVDLSAFYLDIRKDALYCDGAGSLRRRACRTVIDTVFDCLVKWLAPFVCFTAEEAWLT 786

Query: 766 VKPLVDGVEGDTIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLR 813
             P     E D++  Q+ P     ++  +AL +  W     T +R LR
Sbjct: 787 RFP----SEDDSVHFQSFPTVP-GDWRDDALAE-RW-----TKVRRLR 823