Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 879 a.a., Valyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  932 bits (2409), Expect = 0.0
 Identities = 483/956 (50%), Positives = 629/956 (65%), Gaps = 83/956 (8%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           ++KTY+   +E+ LY  WE  G F  H D+    Y+IM+PPPNVTGSLHMGHA   T+ D
Sbjct: 2   LDKTYSAADVEERLYTRWENAGGFAAHPDSPAQPYTIMMPPPNVTGSLHMGHALTFTLQD 61

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
           TLIR  RM G++ LWQ G+DHAGIATQMVVER++A + G T+HD GR+AFI K+WEWKA 
Sbjct: 62  TLIRYHRMSGRDALWQPGSDHAGIATQMVVERQLAGK-GITRHDLGREAFISKVWEWKAH 120

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
           SGGTI +QLRRLGAS DW RERFTMDDG  KAV++VFVRL+KD LIYR KRLVNWDP LH
Sbjct: 121 SGGTIQRQLRRLGASPDWPRERFTMDDGLSKAVRKVFVRLHKDGLIYRDKRLVNWDPVLH 180

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TAISDLEVE +ETKG +WH RYP+ DG K      +IVVATTRPETMLGDT VAV+PED 
Sbjct: 181 TAISDLEVEQRETKGKLWHLRYPV-DGQKGR----FIVVATTRPETMLGDTAVAVHPEDE 235

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           R+KDLIG+ ++LP+  RRIPI+ D++AD  KG+G VKITPAHDFND+EVG+RH LPMINI
Sbjct: 236 RFKDLIGQFVMLPLAHRRIPIIADDYADPTKGSGAVKITPAHDFNDFEVGRRHNLPMINI 295

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
           L  +A +         NG         +P  YQG++RF AR  ++AEFE L LL++I+D+
Sbjct: 296 LDMNAKL---------NGN--------VPQAYQGLDRFVARDKVIAEFEALDLLEKIEDN 338

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
            +T PYGDR GV+IEP LTDQW+V A  LA   + AVE G  +FVPK +EN +F WMR+I
Sbjct: 339 PMTQPYGDRSGVIIEPWLTDQWFVDAAKLAVEPIRAVEEGRTRFVPKHWENTFFEWMRNI 398

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVR--AENNIAADVALRQDDDVLDTWFS 478
           Q WCISRQ+WWGH++PAWY   G +FV   E+E R  A ++      L +D DVLDTWFS
Sbjct: 399 QPWCISRQIWWGHQVPAWYGPDGTIFVEETEDEARTAAHDHYGVATELTRDTDVLDTWFS 458

Query: 479 SALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPF 538
           SALW F TLGWP++TPEL  ++P DVLVTGFDIIFFWVARM+MM  +   D      VPF
Sbjct: 459 SALWPFSTLGWPDQTPELARYYPGDVLVTGFDIIFFWVARMMMMGHYVMGD------VPF 512

Query: 539 KTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNT 598
           + VY+  L+RDE G KMSKSKGNV+DP+DM D                            
Sbjct: 513 RDVYIHALVRDEKGQKMSKSKGNVIDPLDMTD---------------------------- 544

Query: 599 RKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEE 658
                     YGTD+LRFTL AMA+ GRDI    +R+ GYRNFC KLWNA+R+  MN   
Sbjct: 545 ---------QYGTDALRFTLIAMAAQGRDIKMSEQRVAGYRNFCTKLWNAARFCQMN--- 592

Query: 659 QDC---GFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCD 715
            DC            ++L ++WI ++ E  A +    I+ +R + AA   Y F+WN FCD
Sbjct: 593 -DCLPQPVFDPTTARHTL-NRWIGAKTEDCAAKVAEAIEAYRFNDAAQVAYGFVWNTFCD 650

Query: 716 WYLELTKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEG 775
           WYLE+ KP+L       +  T+     VL+  L + HP++P+ITE +W+ +       EG
Sbjct: 651 WYLEMAKPILQGEDGVTKAETQAMAAWVLDTILHILHPMMPFITEELWEKIA----AREG 706

Query: 776 DTIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQD 835
             I         +A    EA  +++WV   ++++R++RAE ++ PG  + +++K A    
Sbjct: 707 QLITAAWPKGQGLAAPEAEA--EMDWVVGVVSAVRSVRAEMNVPPGARIPLVIKGATAVT 764

Query: 836 AARIEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLA 895
            ARIE ++P+L SLA+LESI V +D   +   A  +VG++ L++P+AG+ID D E  RL 
Sbjct: 765 LARIETHRPLLASLARLESIEV-SDTVPSQGAAQVVVGEATLVLPLAGVIDLDRERARLG 823

Query: 896 KEIAKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLEQQKATIA 951
           KE+ +  GE+ARI+ KL N  F+AKAP+ V+ ++RE+ A Y+    K+      IA
Sbjct: 824 KELLRLDGEVARIDKKLSNPAFMAKAPDEVVEEQRERRAEYESQRDKVRDALTRIA 879