Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 957 a.a., valine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  869 bits (2245), Expect = 0.0
 Identities = 468/990 (47%), Positives = 605/990 (61%), Gaps = 114/990 (11%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDA--YSIMIPPPNVTGSLHMGHAFQDTI 58
           +EKTY P  IE  + + WE+   FK      +DA  YSI+IPPPNVTGSLHMGHA  +T+
Sbjct: 2   IEKTYQPADIEARISRAWEDAEAFKAGRPERRDAVPYSIVIPPPNVTGSLHMGHALNNTL 61

Query: 59  MDTLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWK 118
            D L R +RM+G++ LWQ GTDHAGIATQMVVER++   +  ++ D GR  F++++W+WK
Sbjct: 62  QDILCRFERMRGRDVLWQPGTDHAGIATQMVVERQLMERQEPSRRDMGRAKFLERVWQWK 121

Query: 119 AESGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPK 178
           AESGG I  QL+RLGAS DW RERFTMD+G  +AV +VFV L++  LIY+ KRLVNWDPK
Sbjct: 122 AESGGVIVNQLKRLGASCDWSRERFTMDEGLSRAVAKVFVELHRQGLIYKDKRLVNWDPK 181

Query: 179 LHTAISDLEVENKETKGHMWHFRYPL-ADGVKTADGKDYIVVATTRPETMLGDTGVAVNP 237
           L TAISDLEV+  E KG++WH RYP+       AD   +IVVATTRPETMLGD+ VAVNP
Sbjct: 182 LLTAISDLEVQQIEVKGNLWHLRYPIEGKTFDPADPSSFIVVATTRPETMLGDSAVAVNP 241

Query: 238 EDPRYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPM 297
           ED RY  L+GK +ILP+VGRRIPIV DE++D EKG+G VKITPAHDFND+EVGKRH LP 
Sbjct: 242 EDERYTHLVGKHVILPLVGRRIPIVADEYSDPEKGSGAVKITPAHDFNDFEVGKRHHLPQ 301

Query: 298 INILTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEI 357
           IN+L  +  I  A       G    A   E   +  G +RF ARK IVA  ++ G L++I
Sbjct: 302 INVLDIEGKISVADNSAYLEGLPEGA--REFAGEIDGTDRFVARKIIVARLDDFGFLEKI 359

Query: 358 KDHDLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWM 417
           + +   VP+GDR GVVIEP LTDQWYV A  LA+PA+ AV +G+  FVPK +E  YF WM
Sbjct: 360 EPNVHMVPHGDRSGVVIEPFLTDQWYVDAKTLAQPAIAAVRSGETTFVPKNWEKTYFEWM 419

Query: 418 RDIQDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEV----------------RAENNIA 461
            +IQ WCISRQLWWGH+IPAWY   G VFV   EEE                    +++A
Sbjct: 420 ENIQPWCISRQLWWGHQIPAWYGPDGKVFVAETEEEAVGNALGYYVEQEVITPAQAHDMA 479

Query: 462 ADVALRQ-----DDDVLDTWFSSALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWV 516
            D A R+     D+DVLDTWFSSALW F TLGWP++TPEL  ++PT+VLVTGFDIIFFWV
Sbjct: 480 EDPAKREGFITRDEDVLDTWFSSALWPFSTLGWPDETPELDRYYPTNVLVTGFDIIFFWV 539

Query: 517 ARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLES 576
           ARM+MM +HF  D      VPF TVY+  L+RDE G KMSKSKGNV+DP+++ID      
Sbjct: 540 ARMMMMGLHFMDD------VPFPTVYIHALVRDEKGAKMSKSKGNVIDPLNLID------ 587

Query: 577 LVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLE 636
                                           YG D+LRFTLAAMA+ GRDI     R+E
Sbjct: 588 -------------------------------EYGADALRFTLAAMAAQGRDIKLATSRVE 616

Query: 637 GYRNFCNKLWNASRYVLMNTEEQDCGFAAGAELEYSLA----DKWIESQFELAAKEFNGH 692
           GYRNF  KLWNA R+  MN      G  A A  +Y+ A    ++WI  +   A +E    
Sbjct: 617 GYRNFATKLWNACRFAEMN------GCVAPAGFDYTAAKETLNRWIAHETVRAVREVTEA 670

Query: 693 IDNFRLDMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRATRRTLITVLEKTLRLAH 752
           I+++R + AA   Y F+WN +CDWYLEL KPVL     A +  TR  +    ++ L++ H
Sbjct: 671 IESYRFNDAAEAAYRFVWNVYCDWYLELAKPVLMGEEGAAKTETRAMVAWARDEILKILH 730

Query: 753 PVIPYITETIWQSVKP----------------------------LVDGVEGDTIMLQALP 784
           P +P+ITE +W    P                              D + G  ++  A+P
Sbjct: 731 PFMPFITEELWAVTAPRDGLLALAPWSRKGGISDEEVSVLAASAATDPMAGPAML--AIP 788

Query: 785 QYDVANFNQEALD-DIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAARIEANK 843
           +    +F  +A + +I WV   +T+IR++RAE +I P     ++L  A+    AR     
Sbjct: 789 EPQEPDFTDDAAEAEIGWVVDLVTAIRSVRAEMNIVPSTLTPLVLAGASADTNARASRWS 848

Query: 844 PVLVSLAKLESIRVLADGEATPACATALVGKSEL-MIPMAGLIDKDAELDRLAKEIAKTQ 902
            V+  LA++  I   +  +A P  A  L+ + E+  +P+ G++D  AE  RL KE+ K +
Sbjct: 849 DVIKRLARVGEI---SFADAAPQGAVQLLVRGEVAALPLKGVVDFAAEQARLEKELGKAE 905

Query: 903 GEIARIEGKLGNEGFVAKAPEAVITKEREK 932
            +I R E KL NE FVA A E V+ +EREK
Sbjct: 906 ADIKRAEAKLANEKFVANAAEEVVEEEREK 935