Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 959 a.a., valyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score = 1449 bits (3750), Expect = 0.0
 Identities = 702/958 (73%), Positives = 794/958 (82%), Gaps = 6/958 (0%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           MEKTYNP SIEQ LY+ WEE+GYFKPHGD S   Y IMIPPPNVTGSLHMGHAFQDTIMD
Sbjct: 1   MEKTYNPQSIEQALYQNWEEKGYFKPHGDESNGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
           TLIR QRMKGKNTLWQVGTDHAGIATQM+VERK+ AEEGK++HD GR+ FID+IW+WK +
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKVEAEEGKSRHDLGRETFIDRIWDWKNQ 120

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
           SGGTITKQLRRLGASVDWDRERFTMD+G   AVQEVFVRLY DDLIYRGKRLVNWDPKLH
Sbjct: 121 SGGTITKQLRRLGASVDWDRERFTMDEGMSAAVQEVFVRLYNDDLIYRGKRLVNWDPKLH 180

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TAISDLEVENKE +G MWHFRYPLADG  TADGKDY+ VATTRPETMLGD+ VAV+P+D 
Sbjct: 181 TAISDLEVENKEKQGSMWHFRYPLADGALTADGKDYLEVATTRPETMLGDSAVAVHPDDE 240

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           RY+ LIGK I+LPIV RRIPIV D++ DME GTGCVKITPAHDFNDYEVGKRH LPM NI
Sbjct: 241 RYQSLIGKFILLPIVNRRIPIVADDYVDMEFGTGCVKITPAHDFNDYEVGKRHNLPMFNI 300

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
           LT DA IR  AEV NS+G A++     +P ++ G++RF AR AIV EFE LGLL +I  H
Sbjct: 301 LTIDAAIRSQAEVVNSDGTANDELDGSLPERFAGLDRFKARTAIVDEFESLGLLGKIDPH 360

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
            L VPYGDR GVVIEP+LTDQWYV    +AK A+EAVENGDI+FVP+QYENMYFSWMRDI
Sbjct: 361 ALKVPYGDRSGVVIEPLLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI 420

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSA 480
           QDWCISRQLWWGHRIPAWYDE G V+VGR+E EVRA++N+   V LRQD DVLDTWFSSA
Sbjct: 421 QDWCISRQLWWGHRIPAWYDEAGKVYVGRDEAEVRAKHNLDDSVVLRQDPDVLDTWFSSA 480

Query: 481 LWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKT 540
           LWTF TLGWP+ T  LK FHPTDVLVTGFDIIFFWVARMIMMTMHF KDEDGK QVPFKT
Sbjct: 481 LWTFSTLGWPDDTEALKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT 540

Query: 541 VYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRK 600
           VYVTGLIRDE G+KMSKSKGNVLDP+DMIDGIDLE+LV KRTGNMMQPQLAAKIEK+TRK
Sbjct: 541 VYVTGLIRDEQGNKMSKSKGNVLDPLDMIDGIDLEALVEKRTGNMMQPQLAAKIEKSTRK 600

Query: 601 TFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQD 660
            F +GIEA+GTD+LRFTLAAMASTGRDINWDMKRL+GYR+FCNK+WNASRYVLMNTEEQD
Sbjct: 601 EFADGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKIWNASRYVLMNTEEQD 660

Query: 661 CG-----FAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCD 715
           CG       A  E++ SLAD+WI   F    K F+ H++N+R D+AANTLYEF WNQFCD
Sbjct: 661 CGPQSPNGKADGEMQLSLADRWIVGLFNQTVKAFDEHMENYRFDLAANTLYEFTWNQFCD 720

Query: 716 WYLELTKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEG 775
           WYLELTKPVL  GTEA+QR TR TL+TVLE   RL HP++PY+TETIWQ VKPL  GVEG
Sbjct: 721 WYLELTKPVLQNGTEAEQRGTRHTLVTVLEAMQRLLHPMMPYLTETIWQRVKPLA-GVEG 779

Query: 776 DTIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQD 835
           DT+ML   P Y  +  ++ A+ D+EWVK  I ++RN+RAE +I P KPL  ML++ + QD
Sbjct: 780 DTLMLAEFPVYQASKVDEAAMADLEWVKQVIVAVRNIRAELNIAPSKPLNAMLRSVSAQD 839

Query: 836 AARIEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLA 895
            AR+EAN+    +LAKLES+ +LADG+  P   T LVG+ EL+IPMAGLID  AE+ R+ 
Sbjct: 840 KARVEANQTFFATLAKLESMTILADGDTAPMSTTQLVGEMELLIPMAGLIDVAAEMARID 899

Query: 896 KEIAKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLEQQKATIAAL 953
           K+  K  GE  RIEGKL N+GFVAKAPEAVI KER KLA +Q  + KL +QKA +A L
Sbjct: 900 KQFEKLVGEAKRIEGKLNNQGFVAKAPEAVIEKERAKLAEFQRDMDKLCEQKAELAKL 957