Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., valyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  763 bits (1969), Expect = 0.0
 Identities = 411/945 (43%), Positives = 561/945 (59%), Gaps = 79/945 (8%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           + K Y P  +E      WE    F P  D   + +SI+IPPPNVTG+LHMGHA   TI D
Sbjct: 6   LPKGYEPRDVESRWRAHWEGNKTFTPDLDAPGEPFSIVIPPPNVTGALHMGHALNLTIQD 65

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
            L R  R KGK  LW  GTDHAGIATQ VVER +A +EGK +HD GR+ FI+++WEW+ E
Sbjct: 66  ILCRHARQKGKKVLWVPGTDHAGIATQNVVERGLA-KEGKGRHDLGREKFIERVWEWREE 124

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
            G  I  Q+R +GASVDW RERFTMD+G  +AV++VFV+LY D LIY+G  ++NW  + H
Sbjct: 125 YGTRILNQIRAMGASVDWTRERFTMDEGLSRAVRQVFVKLYDDGLIYKGDYIINWCNRCH 184

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TA++D EV++   K H+W  RYPLADG         +V+ATTRPETM GDT V V+PED 
Sbjct: 185 TALADDEVDHLPRKDHLWQLRYPLADG------SGELVIATTRPETMFGDTAVCVHPEDE 238

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           RY   IGK + LP+  R IP++ D + D E GTG +K+TP+HD ND+E+G RH+L  +  
Sbjct: 239 RYTAFIGKMVKLPLTDREIPVIADNYVDREFGTGALKVTPSHDHNDWELGHRHKLEFL-- 296

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
                      +V + NG  +   G      Y G+ +   RK +VA+    G+L + ++ 
Sbjct: 297 -----------QVIDENGVMNEHAGI-----YAGLTKEECRKRVVADLAAQGVLVKEEEL 340

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
           D +V +  R   VIEP ++ QW+V A  +A  A  AV     Q  P  +E  Y++W+ +I
Sbjct: 341 DHSVGHCYRCKSVIEPHVSTQWFVAASKMAPRARTAVPAAT-QIFPDNWEKTYYNWLDNI 399

Query: 421 QDWCISRQLWWGHRIPAWY-DEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSS 479
           +DWCISRQ+WWGHRIPAW   + G + V  +  E  A         L QD+DVLDTWFSS
Sbjct: 400 RDWCISRQIWWGHRIPAWTCGDCGKLIVAVDAPERCA----CGSANLTQDEDVLDTWFSS 455

Query: 480 ALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFK 539
           ALW F T+GWP++T ELK F+PT VLVTGFDI+FFWVARM+MM +HF  +      VPF+
Sbjct: 456 ALWPFSTMGWPDETRELKTFYPTSVLVTGFDILFFWVARMMMMGLHFMDE------VPFR 509

Query: 540 TVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTR 599
            VY+  L+RD  G KMSKS GNV+DP++MID                             
Sbjct: 510 HVYIHALVRDAEGRKMSKSTGNVIDPLEMID----------------------------- 540

Query: 600 KTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQ 659
                    YGTDSLRFTLAA A+ GRDI    +R+EGYR+F NKLWNA+R+ LMN  + 
Sbjct: 541 --------KYGTDSLRFTLAAFAAMGRDIKLSEERIEGYRHFVNKLWNAARFALMNLPDD 592

Query: 660 DCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLE 719
           +       +    L  +WI  + E   +  +  I  +R + AA  +Y FIWN+FCDWYLE
Sbjct: 593 EVPAPVDLDTVQGLHHRWILHRLEEMKESTDAAIVGYRFNDAAQGMYRFIWNEFCDWYLE 652

Query: 720 LTKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIM 779
           L KP +  G E ++ A +  L+TVL +TL L HP++P+IT  IW +    + G  G  + 
Sbjct: 653 LIKPDMQAGGE-RKAAAQHVLLTVLRETLTLLHPIMPFITCEIWAA----LPGNAGTDLA 707

Query: 780 LQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAARI 839
           +Q  P         E    +E V+  I ++R +RAE +I P   L  +++ ANE D   +
Sbjct: 708 VQPFPAARPGCVKAEDAARMELVQGVIGAVRTIRAELNIAPSLRLTALVRTANEHDRQVL 767

Query: 840 EANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLAKEIA 899
           E N+ +L+ LA+LE+       EA  A A+ +V  +E+++P+ G +D +AEL RL KE+ 
Sbjct: 768 EENRQMLLVLARLENAEFGPAIEAPKASASNVVSGNEVIVPLTGAVDFEAELARLDKELG 827

Query: 900 KTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLE 944
           K + ++ ++  KL NE FV KAP  V+ KER +     +A  KLE
Sbjct: 828 KIEKDLVQVNKKLANESFVDKAPAEVVAKERARAGELADAKAKLE 872