Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis JJ

 Score =  168 bits (426), Expect = 1e-45
 Identities = 179/853 (20%), Positives = 335/853 (39%), Gaps = 170/853 (19%)

Query: 3   KTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDA--YSIMIPPPNVTGSLHMGHAFQDTIMD 60
           K+ N   +++ + + W+++  +K     ++    Y  +  PP  +G++H+G A+   I D
Sbjct: 5   KSVNFRELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKD 64

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKT-KHDYGRDAFIDKIWEWKA 119
           T++R +R++G N L + G D  G+  ++ VE +      K  +   G   FI+K  E+  
Sbjct: 65  TVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFAL 124

Query: 120 ESGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKL 179
              G +  Q   LG  +D++     +   + +       + ++ +L+ +  R   W P+ 
Sbjct: 125 NHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRC 184

Query: 180 HTAISDLEV--ENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAV-- 235
            T++++ EV  E KE      + ++      K     +YI + TT P T+  +  V V  
Sbjct: 185 ETSLAEHEVRGEYKEVLDPSVYVKF------KLEKSDEYITIWTTTPWTLPSNMLVCVNP 238

Query: 236 -----------------------------------NPEDPRYK--------DLIGKEIIL 252
                                              N E  ++          LIG + I 
Sbjct: 239 EFDYAYVSVEFENGTVETWIIAEKLVNDVMKKAEKNNEISKFSISKVVKGDSLIGLKYIH 298

Query: 253 PIVGRRIP------------IVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           P++                 IV  +H  +E GTG V   P    +D+ +GK H +P+   
Sbjct: 299 PLLEENEKQQEFAKIENVHTIVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPVY-- 356

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
               A I D       NG+ +++        ++G       ++++       LL      
Sbjct: 357 ----APIDD-------NGKYTDSI-------WKGTFVKDMDESVIETLLSKNLLVNSGKV 398

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
             T P+  R    +    T+QW++    +    +E  +   + +VP   +  Y + +  +
Sbjct: 399 KHTYPHCWRCKTPLLFRATEQWFLSISKIKDSIIE--QGKTVDWVPDWVKTRYVNGVSFV 456

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVF-----VGRNEEEVRAENNIAADV----------- 464
            DW ISRQ +WG  +P W  E+   +     VG  +E    ++   +D+           
Sbjct: 457 GDWNISRQRYWGIPLPIWICEECGKYEVIGSVGELKERANEKDVDLSDIHKPAVDKITLT 516

Query: 465 -----ALRQDDDVLDTWFSSALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARM 519
                 +++  DVLD W+ S L  + ++G        K       +  G D +  W    
Sbjct: 517 CSCGGKMKRTPDVLDVWYDSGLAPYASIG-------SKKLKKAQFITEGNDQVTKWFYSQ 569

Query: 520 IMMTMHFCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVA 579
             ++     D        ++   + G   DE G+KMSKS GN++ P D+ D         
Sbjct: 570 HALSAVVFDDTS------YEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTD--------- 614

Query: 580 KRTGNMMQPQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYR 639
                                        YG D LRF L +      D+ +    ++  R
Sbjct: 615 ----------------------------QYGADVLRFYLLSANKAWEDLRFSYSEMDETR 646

Query: 640 NFCNKLWNA----SRYVLMNTEEQDCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDN 695
           +  N LWN+    + Y++++    +  +    + E    D WI S+    AKE    ++ 
Sbjct: 647 SMLNTLWNSYAFSANYMVLDDFVPNNEYFKHVKDE----DAWILSRINTVAKEAVEALEK 702

Query: 696 FRLDMAANTLYEFIWNQFCDWYLELTKPVLW-KGTEAQQRATRRTLITVLEKTLRLAHPV 754
             L +    L +FI N F  WY++L +   W +  + Q+ +  +TL  V+ K + +  PV
Sbjct: 703 PHLHVYTWALRDFILNDFSRWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKLISIMAPV 762

Query: 755 IPYITETIWQSVK 767
            P+++E I+Q++K
Sbjct: 763 TPHLSEEIYQNLK 775