Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 958 a.a., valyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1443 bits (3735), Expect = 0.0
 Identities = 696/957 (72%), Positives = 794/957 (82%), Gaps = 5/957 (0%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           MEKTY+P SIEQ LY+ WEE+GYFKPHGD S+  Y IMIPPPNVTGSLHMGHAFQDTIMD
Sbjct: 1   MEKTYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMD 60

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
           TLIR QRMKGKNTLWQVGTDHAGIATQM+VERK+ AEEGK++HD GRD F++K+WEWKA+
Sbjct: 61  TLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQ 120

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
           SGGTITKQLRR+GASVDWDRERFTMD+G  KAVQEVFVRLY+DDLIYRGKRLVNWDPKLH
Sbjct: 121 SGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRLYEDDLIYRGKRLVNWDPKLH 180

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TAISDLEVENKE +GHMWH RYPLADG  TADGKDY+ VATTRPETMLGD+ VAV+P+D 
Sbjct: 181 TAISDLEVENKEKQGHMWHLRYPLADGELTADGKDYLEVATTRPETMLGDSAVAVHPDDE 240

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           RY+ LIGK I+LPIV RRIPIV D++ DM  GTGCVKITPAHDFNDYEVGKRH+LPM N+
Sbjct: 241 RYQALIGKYILLPIVNRRIPIVADDYVDMAFGTGCVKITPAHDFNDYEVGKRHKLPMFNV 300

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
           LT DA IR +AEV N++G  + +    +P +Y G++RF AR AIVAEFE LGLL++I  H
Sbjct: 301 LTLDAAIRSSAEVVNTDGTINTSLDGSLPERYAGLDRFKARDAIVAEFETLGLLEKIAPH 360

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
            L VPYGDR GVVIEPMLTDQWYV    +AK A+EAVENGDI+FVP+QYENMYFSWMRDI
Sbjct: 361 GLKVPYGDRSGVVIEPMLTDQWYVAVAPMAKTAIEAVENGDIKFVPQQYENMYFSWMRDI 420

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSA 480
           QDWCISRQLWWGHRIPAWYD  G V+VGR E EVRA+++I   +ALRQD+DVLDTWFSSA
Sbjct: 421 QDWCISRQLWWGHRIPAWYDTNGKVYVGRTEAEVRAKHDIDDAIALRQDEDVLDTWFSSA 480

Query: 481 LWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKT 540
           LWTF TLGWP+   +LK FHPTDVLVTGFDIIFFWVARMIMMTMHF KDEDGK QVPFKT
Sbjct: 481 LWTFSTLGWPDNVEDLKTFHPTDVLVTGFDIIFFWVARMIMMTMHFIKDEDGKPQVPFKT 540

Query: 541 VYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRK 600
           VYVTGLIRDE G+KMSKSKGNVLDP+DMIDGIDLE+LV KRTGNMMQPQLAAKIEK+TRK
Sbjct: 541 VYVTGLIRDEAGNKMSKSKGNVLDPLDMIDGIDLETLVEKRTGNMMQPQLAAKIEKSTRK 600

Query: 601 TFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQD 660
            FENGIEA+GTD+LRFTLAAMASTGRDINWDMKRL+GYR+FCNKLWNASRYVLMNTE QD
Sbjct: 601 EFENGIEAHGTDALRFTLAAMASTGRDINWDMKRLDGYRSFCNKLWNASRYVLMNTEGQD 660

Query: 661 CGFAA----GAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDW 716
           CG  +    G E+E SLAD+WI   F    K ++ H+ ++R D+AANTLYEF WNQFCDW
Sbjct: 661 CGPNSPDYQGGEMELSLADRWIIDLFNQTVKTYDEHMASYRFDLAANTLYEFTWNQFCDW 720

Query: 717 YLELTKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGD 776
           YLELTKPVL  GTEAQ R TR TL+ VLE   RL HP++PYITETIWQ VKPL  GV+GD
Sbjct: 721 YLELTKPVLQNGTEAQMRGTRHTLVNVLEAMQRLMHPMMPYITETIWQRVKPLT-GVQGD 779

Query: 777 TIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDA 836
           TIML   P +D A  +  A+ D+EWVK  I ++RN+RAE +I P KPL  +L+  + QD 
Sbjct: 780 TIMLAPFPAFDAAKVDATAMADLEWVKQVIVAVRNIRAELNIAPSKPLNALLRGVSAQDK 839

Query: 837 ARIEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLAK 896
           ARIEAN+    +LA+LES+ +L +GE  P   T L+G+ EL+IPMAGL+D  AE+ R+ K
Sbjct: 840 ARIEANQAFFATLARLESMTILGEGETAPMSTTGLIGEMELLIPMAGLVDVAAEMARIDK 899

Query: 897 EIAKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLEQQKATIAAL 953
           ++ K   EIARIEGKL NEGFVAKAP AVI KER K+A     + KL +QKA  A L
Sbjct: 900 QLEKLTQEIARIEGKLSNEGFVAKAPPAVIDKERAKMADLSRDIDKLTEQKAEFAKL 956