Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 938 a.a., isoleucyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  154 bits (390), Expect = 2e-41
 Identities = 212/986 (21%), Positives = 359/986 (36%), Gaps = 188/986 (19%)

Query: 6   NPTSIEQDLYKTWEEQGYFKP--HGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLI 63
           N T  E ++ + WE+   +         +  Y +   PP   G++HMGHA    + D ++
Sbjct: 20  NLTQREPEMLRKWEKDDAYGAMVRASGQQGTYVLHDGPPYANGNIHMGHALNKILKDIIV 79

Query: 64  RCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGG 123
           + + ++G    +  G D  G+  ++ VE ++    G+ K      A   +  ++  +   
Sbjct: 80  KSRNLQGFKAEYVPGWDCHGLPIELKVEHEL----GEKKRTMPAHAVRKRCRQYAEKYLD 135

Query: 124 TITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAI 183
              K+ +RLG    WD+   TM   +  A             + R K+ + W     TA+
Sbjct: 136 IQRKEFKRLGVFGAWDKPYVTMHPSYEAATARELGNFAAKGGLVRSKKPIYWCCSCQTAL 195

Query: 184 SDLEVENKETKGHMWHFRYPLAD--------GVKTADGKDYIVVATTRPETMLGDTGVAV 235
           ++ EVE  +      H R+PL D        GV  A    YIV+ TT P T+  +  VAV
Sbjct: 196 AEAEVEYHDHTSPSVHVRFPLRDPRVAEVLPGVDPAHA--YIVIWTTTPWTLPDNMAVAV 253

Query: 236 NPEDPRY------------------------------------KDLIGKEIILPIVGRRI 259
           +P+                                        + L G +   P   R  
Sbjct: 254 HPDFDYVVVRHGGDFHIVAEGLLEACLKAFKWDEHEVVARIGGRALEGLKATHPFYDRPS 313

Query: 260 PIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINILTFDANIRDAAEVFNSNGE 319
           PIV  ++  +E GTGCV   P H   DYE G R+ L + + LT +    D  E F     
Sbjct: 314 PIVLADYVTLESGTGCVHTAPGHGREDYETGLRYGLDIYSPLTDEGRYLDCVEFF----- 368

Query: 320 ASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDHDLTVPYGDRGGVVIEPMLT 379
                         GM  F A   ++ +  E+G L        + P+  R    +    T
Sbjct: 369 -------------AGMTIFEANPKVIEKLREVGNLLAEGRITHSYPHCWRCKKPVIFRAT 415

Query: 380 DQWYV--RAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRI-- 435
            QW++      L + A++A+ + D++++P   +    + +    DWCISRQ  WG  I  
Sbjct: 416 TQWFIAMERNDLRQKALDAIRD-DVRWIPSWGQERIHNMIEFRPDWCISRQRMWGVPIVA 474

Query: 436 -------PAWYDEQGNVFVGRNEEEVRAENNIAAD------------VALR--------- 467
                   AW D        R+  E  A++    D              LR         
Sbjct: 475 LLCEDCGEAWNDADWM----RDIAERFAKHATGCDYWYETDLSDIVPAGLRCPKCGGDHW 530

Query: 468 -QDDDVLDTWFSSALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHF 526
            ++ D+LD WF S     GT          +   P D+ + G D    W    ++ ++  
Sbjct: 531 KKETDILDVWFDS-----GTSFAAVVEQREECGFPADLYLEGSDQHRGWFHSSLLASI-- 583

Query: 527 CKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMM 586
                 +   P+++V   G + D +G KMSKS GNV+ P ++ID                
Sbjct: 584 ----GTRGVPPYRSVLTHGYVVDGDGRKMSKSVGNVVAPQEIID---------------- 623

Query: 587 QPQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLW 646
                                 +G + LR  +A++     DI    + L    +   ++ 
Sbjct: 624 ---------------------KHGAEVLRLWVASV-DYREDIRISEEILNRLVDAYRRIR 661

Query: 647 NASRYVLMN----TEEQDCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAA 702
           N  RY+L N    T E    F A   L     D++       A +        +      
Sbjct: 662 NTCRYLLGNISDLTPETMVPFEAMDPL-----DRFALDLASRAHERIQDAYTEYEFHKVF 716

Query: 703 NTLYEFIWNQFCDWYLELTKPVLWKGT--EAQQRATRRTLITVLEKTLRLAHPVIPYITE 760
           +TL+         +YL++ K  L+        +R+ +  L  +L   +R   PV+ +  E
Sbjct: 717 HTLHNLCVTDLSAFYLDILKDRLYSSAADSHARRSAQTALYRILMLMVRDMAPVLSFTAE 776

Query: 761 TIWQSVKPLVDGVEGDTIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINP 820
            ++  V      +  D I + ALP  D   F  +      W K  + ++R+         
Sbjct: 777 EVFGYVPA---ALRPDVISVFALPATDAPAFTLDTTSRAAWEK--LLAVRS-------ET 824

Query: 821 GKPLEVMLKAANEQDAARIEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIP 880
            K +E + K      +  +  +    V+L    S++   +G  +   A  +V + E+M  
Sbjct: 825 TKAIEPLRK------SGEVGHSLDTHVTLFADPSLKATLEGLGSDLRAMFIVSRLEVMDL 878

Query: 881 MAGLID--KDAELDRLAKEIAKTQGE 904
                D     EL  L   + K +GE
Sbjct: 879 ADAPADAWTSEELPELKVTVRKAEGE 904