Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 884 a.a., valyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  753 bits (1944), Expect = 0.0
 Identities = 402/944 (42%), Positives = 562/944 (59%), Gaps = 77/944 (8%)

Query: 1   MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMD 60
           + K Y P  +E+   + WE+   F P  D   + YSI+IPPPNVTG+LH+GHA    ++D
Sbjct: 6   LPKGYEPRDVEERWRRHWEDNRTFTPDMDAPGEPYSIVIPPPNVTGALHIGHALNHVLID 65

Query: 61  TLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAE 120
            L R  R +GK  LW  GTDHAGIATQ VVER +A +EG ++HD GR+AFI+++W+WK E
Sbjct: 66  VLCRNARQQGKKVLWLPGTDHAGIATQNVVERALA-KEGLSRHDLGREAFIERVWQWKEE 124

Query: 121 SGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLH 180
            G  I  Q+R LG SVDW RERFTMD+G  KAV++VFV LY    IYRG  ++NW  + H
Sbjct: 125 YGNRILNQIRMLGDSVDWTRERFTMDEGLSKAVRKVFVDLYNGGYIYRGNYIINWCNRCH 184

Query: 181 TAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPETMLGDTGVAVNPEDP 240
           TA++D EV++   +GH++H RY   DG  +      +V+ATTRPET++ DTGV V+PED 
Sbjct: 185 TALADDEVDHMPEQGHLYHVRYDFEDGSGS------VVIATTRPETIMADTGVCVHPEDE 238

Query: 241 RYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINI 300
           RY  LIGK+I++P++GR +P+  D + D E GTG +K+TP HD ND+ +G+RH L  I  
Sbjct: 239 RYAGLIGKKILVPVIGRAVPLFADTYVDREFGTGALKVTPCHDPNDWTLGERHGLAFIQC 298

Query: 301 LTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGLLQEIKDH 360
           +  D N+   A                    Y G+ +   RK IVA+ E  G L  +++ 
Sbjct: 299 IDEDGNMTAEA------------------GPYAGLTKEECRKRIVADLEASGQLVRVEEL 340

Query: 361 DLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDI 420
           + +V +  R   V+EP +++QW+V +  LA  A  AV     Q  P+ +   YF+W+ +I
Sbjct: 341 NHSVGHCYRCKTVVEPHMSEQWFVASTKLAPRARAAVPQMT-QIFPESWMKTYFNWLDNI 399

Query: 421 QDWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIAADVALRQDDDVLDTWFSSA 480
           +DWCISRQ+WWGHRIPAW   +    +   ++     +    D  L QD DVLDTWFSSA
Sbjct: 400 RDWCISRQIWWGHRIPAWTCGKCGKLIVSEQDPTACPDCGCTD--LTQDPDVLDTWFSSA 457

Query: 481 LWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKT 540
           LW F T+GWP+KT +L  F+PT VLVTGFDI+FFWVARM+M+ MHF  +      VPFK 
Sbjct: 458 LWPFSTMGWPDKTKDLATFYPTSVLVTGFDILFFWVARMMMLGMHFMDE------VPFKH 511

Query: 541 VYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRK 600
           VY+  L+RD  G KMSKS GNV+DP+ MID                              
Sbjct: 512 VYLHALVRDGEGRKMSKSTGNVIDPLAMID------------------------------ 541

Query: 601 TFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQD 660
                   YGTDSLRFTLAA A+ GRDI     R+EGYR+F NK+WNA+R+ LMN  E+ 
Sbjct: 542 -------KYGTDSLRFTLAAFAAMGRDIKLSEDRIEGYRHFVNKVWNAARFSLMNLPEE- 593

Query: 661 CGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLEL 720
              A   +    +  KWI  + E         ID +R +  A  LY F WN+FCDWYLEL
Sbjct: 594 APAALDLDNVKGMHHKWILHRLEELKASQAAGIDGYRFNEVAQGLYRFWWNEFCDWYLEL 653

Query: 721 TKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIML 780
            KP +  G E Q  A +  L TVL + L L HP +P++T  +WQ++     G  GD I  
Sbjct: 654 IKPDMQAGGERQATA-QYVLWTVLREALLLLHPFMPFVTAEVWQALP----GHAGDDIAT 708

Query: 781 QALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPLEVMLKAANEQDAARIE 840
           +  P       + +  + +E V+A I+++R +RAE +I P   L  +++ A+ +DAA +E
Sbjct: 709 KLYPAARPGCRDVKDAEHMELVQATISAVRTIRAELNIAPSYRLTTLVRPASAEDAATLE 768

Query: 841 ANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGLIDKDAELDRLAKEIAK 900
             + +L++LA+L+ + V  D EA  A A+++V  +E+++P+ G +D +AEL RL KE+ K
Sbjct: 769 EGREMLMTLARLDGLTVAVDVEAPKASASSVVAGNEVIVPLTGAVDFEAELARLDKELGK 828

Query: 901 TQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKLE 944
            + +  ++  KL NE FV+KAP  V+ KER +     +A  KLE
Sbjct: 829 IEKDFVQVNKKLANESFVSKAPADVVAKERARAEELSDAKAKLE 872