Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 1037 a.a., valyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  706 bits (1822), Expect = 0.0
 Identities = 425/1079 (39%), Positives = 570/1079 (52%), Gaps = 191/1079 (17%)

Query: 1    MEKTYNPTSIEQDLYKTWEEQGYFKPHGDTSKD-AYSIMIPPPNVTGSLHMGHAFQDTIM 59
            MEKT+N    E  LY  WE +G F    + S+D  + +MIPPPNVTGSLHMGHAF +T+ 
Sbjct: 3    MEKTFNAAEAEPRLYARWEAEGCFAAGANASRDETFCVMIPPPNVTGSLHMGHAFNNTLQ 62

Query: 60   DTLIRCQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKA 119
            D LIR +RM+G +TLWQ GTDHAGIATQMV ER++AA    T+ + GR  F+ ++WE K 
Sbjct: 63   DILIRWKRMQGYDTLWQPGTDHAGIATQMVTEREMAANGEPTRAEMGRAKFLARVWEQKV 122

Query: 120  ESGGTITKQLRRLGASVDWDRERFTMD--DG---------FYKAVQEVFVRLYKDDLIYR 168
            +S GTI  QL+R+GAS DW RE FTM   DG         F+ AV +VFV +Y   LIYR
Sbjct: 123  KSRGTIIGQLKRIGASCDWSREAFTMGGADGDPEKGNGPNFHDAVIKVFVDMYDKGLIYR 182

Query: 169  GKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPLADG------VKTADG-------KD 215
            GKRLVNWDP   TAISDLEVEN ET GHMWHF+YPLA G       K ADG       +D
Sbjct: 183  GKRLVNWDPHFETAISDLEVENIETPGHMWHFKYPLAGGETYEYVEKDADGTVTLRETRD 242

Query: 216  YIVVATTRPETMLGDTGVAVNPEDPRYKDLIGKEIILPI----VGRRIPIVGDEHADMEK 271
            YI +ATTRPETMLGD  VAV+P D RY  ++GK   +P+      R IPI+ DE+ D   
Sbjct: 243  YISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCEIPVGPKEHRRLIPIITDEYPDPTF 302

Query: 272  GTGCVKITPAHDFNDYEVGKRHQLPMINILTFDANIRD--------------AAEVFNSN 317
            G+G VKIT AHDFNDY+V KR  +PM  ++   A +RD               AE   + 
Sbjct: 303  GSGAVKITGAHDFNDYQVAKRGGIPMYRLMDTKARMRDDGAPYAKAAAIAMEVAEGTRTL 362

Query: 318  GEASNAYGTEIPAKYQGMERFAARKAIVAEFEELGL------------------------ 353
             EA       +P   +G++RF ARKA+V +    GL                        
Sbjct: 363  DEAEADSLNLVPDDLRGLDRFEARKAVVDQITAEGLAVMVPNPAAAASTEEGAAATEEVP 422

Query: 354  --LQEIKDHDLTVPYGDRGGVVIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYEN 411
              L  ++   +  P+GDR  VVIEPMLTDQW+V A  +  PA++AV NG ++ +P+  E 
Sbjct: 423  AFLPLVESKPIMQPFGDRSKVVIEPMLTDQWFVDAEQIVGPALDAVRNGTVKILPESGEK 482

Query: 412  MYFSWMRDIQDWCISRQLWWGHRIPAWYD----EQGNV------------FVGRNEEEVR 455
             Y+ W+ +I+ WCISRQLWWGH+IP WY     E   V            FV  + +E R
Sbjct: 483  TYYHWLDNIEPWCISRQLWWGHQIPVWYGPRRVEVNGVETLDFDPANAVHFVAHSVDEAR 542

Query: 456  AENNIAADVALRQDDDVL------------------------------------------ 473
            A+   A   AL   D V+                                          
Sbjct: 543  AK--AAGYYALPDADKVIIVRSFPRGTPGSGPTDGRVDPMTDAVAAAQRAEAVPDAIPLV 600

Query: 474  ------DTWFSSALWTFGTLGWPEKTPELKVFHPTDVLVTGFDIIFFWVARMIMMTMHFC 527
                  DTWFSS LW  GTLGWPE T EL+ + PT  LVTG DI+FFWVARM+MM +   
Sbjct: 601  QDPDVLDTWFSSGLWPIGTLGWPEDTEELRKYFPTSTLVTGQDILFFWVARMMMMQLAV- 659

Query: 528  KDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPIDMIDGIDLESLVAKRTGNMMQ 587
                   +VPF+ VY+ GL+RD  G KMSKS GNV+DP+++ID                 
Sbjct: 660  -----TGEVPFREVYLHGLVRDAKGKKMSKSVGNVVDPLEIID----------------- 697

Query: 588  PQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAAMASTGRDINWDMKRLEGYRNFCNKLWN 647
                                 YG D+LRF+ AAMAS G  +  D++R++GYRNF  KLWN
Sbjct: 698  --------------------EYGADALRFSSAAMASLGGVLKLDLQRVQGYRNFGTKLWN 737

Query: 648  ASRYVLMN---TEEQDCGFAAGAELEYSLADKWIESQFELAAKEFNGHIDNFRLDMAANT 704
            A+R+  MN   T         G        ++WI  +     +  +  +  ++ + AAN 
Sbjct: 738  ATRFAEMNEVFTAHTQSAMPPGCT---ETVNRWIIGETAKVREAVDTALAEYKFNDAANA 794

Query: 705  LYEFIWNQFCDWYLELTKPVLWKGTEAQQRATRRTLITVLEKTLRLAHPVIPYITETIWQ 764
            LY F+W + CDWY+E  KP+L  G +A +  TR  +  VL++   L HP++P+ITE +W 
Sbjct: 795  LYAFVWGKVCDWYVEFAKPLLLDGDDATKAETRAVMAWVLDQCFILLHPIMPFITEELWG 854

Query: 765  SVKPLVDGVEGDTIMLQALPQYDVANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKPL 824
            +      G     ++    P Y     + +A  ++ WV + I S+R++RA+  +  G  +
Sbjct: 855  TT-----GQRDKMLVHADWPSYGADLVDADADREMNWVISLIESVRSVRAQMRVPAGLYV 909

Query: 825  EVMLKAANEQDAARIEANKPVLVSLAKLESIRVLADGEATPACATALVGKSELMIPMAGL 884
             V+  A +E        N+ ++  LA++E I   AD  A     T  V      +P+A +
Sbjct: 910  PVVQVALDEAGQRAYANNETLIKRLARIEGI-TKAD-TAPKGALTIPVEGGTFALPLADI 967

Query: 885  IDKDAELDRLAKEIAKTQGEIARIEGKLGNEGFVAKAPEAVITKEREKLAGYQEALVKL 943
            ID  AE DRL K +AK Q ++  + G+L N  FVA AP  V+ + RE+LA  +  L  L
Sbjct: 968  IDVSAEKDRLGKTLAKLQKDLGGLRGRLSNAKFVASAPAEVVEENRERLAAGEAELATL 1026