Pairwise Alignments

Query, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 869 a.a., leucyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  137 bits (344), Expect = 4e-36
 Identities = 199/859 (23%), Positives = 317/859 (36%), Gaps = 189/859 (22%)

Query: 5   YNPTSIEQDLYKTWEEQGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIR 64
           ++P  IE      W+  G F    D +K  Y ++   P  +G +HMGH    T+ D + R
Sbjct: 14  FDPAQIEPKWRAAWDLAGTFTATPDPAKQKYYVLEMFPYPSGRIHMGHVRNYTMGDVIAR 73

Query: 65  CQRMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGT 124
            +   G + L  +G D  G    M  E    A  G  K             +W   +   
Sbjct: 74  YKASCGFSVLHPMGWDAFG----MPAENAAMATGGHPK-------------DWTYANIAE 116

Query: 125 ITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDLIYRGKRLVNWDPKLHTAI- 183
           +  Q++ LG S+DW RE  T D+ +Y   Q +F+   +  L+YR   +VNWDP   T + 
Sbjct: 117 MRAQMKPLGLSIDWSREFATCDEAYYGQQQSMFLDFLEKGLVYRKNAVVNWDPVDMTVLA 176

Query: 184 -----------SDLEVENKETKGHMWHFRY-PLADGVKTA-------------------- 211
                      S  EVE +E     W F+    AD + +A                    
Sbjct: 177 NEQVIDGKGWRSGAEVERRELT--QWFFKISDFADDLLSALDGLENWPEKVRLMQANWIG 234

Query: 212 ------------DGKDYIVVATTRPETMLGDTGVAVNPEDPRYKDLIGKEIILPIVGRRI 259
                       DG D I V TTRP+T++G + V ++P  P  K L  +           
Sbjct: 235 KSRGLEFAFARTDGGDPIPVYTTRPDTLMGASFVGISPGHPIAKALAAQR---------- 284

Query: 260 PIVGDEHADMEKG---TGCVKITPAHDFNDYEVGKRHQL-PMINILTFDANIRDAAEVFN 315
           P V D  A++ +G      ++  P   F D  +  RH L P   +  + AN         
Sbjct: 285 PEVADFLAEVARGGTTEAALETAPKLGF-DTGITVRHPLDPNWELPVWIANF-------- 335

Query: 316 SNGEASNAYGT----EIPAKYQGMERFAARKAIVAEFEELGLLQEIKDHDLTVPYGDRGG 371
                   YGT      PA  Q    F  +        +L ++      D   P GD   
Sbjct: 336 ----ILMDYGTGAIFACPAHDQRDLDFCRK-------YDLPVIDTFFALDDPTPVGDTAF 384

Query: 372 V--VIEPMLTDQWYVRAGILAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQ-----DWC 424
           V    EP+   + +  AG+      EA+E   I F           W R ++     DW 
Sbjct: 385 VPPKTEPVRWVEHF--AGLDIATGQEAIE-ATIDFAEAA------GWGRGVEQFRLRDWG 435

Query: 425 ISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRA----ENNIAADVAL-------------- 466
           +SRQ +WG  IP  + ++  V   R E    A    E+    D ++              
Sbjct: 436 LSRQRYWGCPIPVVHCDKCGVVPERKENLPIALPYDEDGRPIDFSIPGNPLDRHPSWRDC 495

Query: 467 ---------RQDDDVLDTWFSSALWTFGTLGWPE-KTP----ELKVFHPTDVLVTGFD-- 510
                    R++ D +DT+  S+ W F     P  +TP    E+  +   D  + G +  
Sbjct: 496 ACPACGAPARRETDTMDTFVDSS-WYFARFTAPRAETPTDPAEVGYWMNVDQYIGGVEHA 554

Query: 511 IIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKGNVLDPI---- 566
           I+    +R     MH C      A+ PF  ++  G++       + K+ G    P+    
Sbjct: 555 ILHLLYSRFFARAMHLCGHLPESAREPFDALFTQGMVT----HAIYKTTGTDGRPVYHYP 610

Query: 567 DMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFE--NGIEAYGTDSLRFTLAAMAST 624
           + ++  + E  V K+TG  +    +AK+ K+     +    I+AYG D+ R+ + + +  
Sbjct: 611 EEVETTE-EGAVLKKTGAPVDIVPSAKMSKSKNNVVDPLAIIDAYGADTARWFVMSDSPP 669

Query: 625 GRDINWDMKRLEGYRNFCNKLWNASRYVLMNTEEQDCGFAAGAELEYSLADKWIESQFEL 684
            RD+ W     E       ++W  +  +  N EE     A  AE   +LA          
Sbjct: 670 ERDVEWTASGAEAAFKHLGRVWRLAEDLRRNAEE--AATAGSAEEARALA-----RASAR 722

Query: 685 AAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQRATRRTLITVL 744
           A  E    I+ F  + +   LYEF                    T  + +A R      L
Sbjct: 723 AIAEVTAGIEGFAFNKSVAKLYEF------------------TNTIQKSKAPRAEKRAAL 764

Query: 745 EKTLRLAHPVIPYITETIW 763
           +   +L  P+ P++ E +W
Sbjct: 765 KTMAQLMSPMTPHLAEEVW 783