Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., FIG000906: Predicted Permease from Pseudomonas fluorescens FW300-N2E2

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 4/169 (2%)

Query: 5   RYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMGLLML 64
           RY+      +  A+  ++  +     FI  ++D SD    T  + S V L  P     ML
Sbjct: 6   RYIGSSVFMAILAVLGIILGLATLFAFIDEMSDVSDTYTLTD-VASYVLLTAPRRLYDML 64

Query: 65  PLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPWS 124
           P++  IG L+  G L + SE+T+M A G+    ++ A +   L+   V      ++AP +
Sbjct: 65  PMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGVLIGEYIAPAT 124

Query: 125 QDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIE-NRKLYNV 172
           ++       +  A+   D     H      G   + I++++ N  LY V
Sbjct: 125 ENTAQ--ANRSLAQGGGDAQSAKHGLWHRQGDEFIHINSVQPNGILYGV 171