Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 92/374 (24%), Positives = 165/374 (44%), Gaps = 35/374 (9%)

Query: 2   IIVRYLIRE-TIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           +I RY+ R  TI     +  ++ +V+ +Q    V      G+   +  L +  L +P++ 
Sbjct: 3   LIERYIFRRATIMFLATLLPLMGIVWTTQALTNVNLVTDSGQSIIAF-LKLATLILPSVV 61

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLA--LITASVAAFNAL 118
            ++LP +L IG+  T   +  +SE+TV++A G     +IR  ++LA  L   S A  N  
Sbjct: 62  PIILPFALVIGVTQTLSAMNTDSELTVLSAAGSSRMSIIRPVMFLAAGLSVLSFAIDN-- 119

Query: 119 WLAPWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLA 178
           ++ P+S+     ++    A+    ++Q+  F++  DG  V          L  +FVA   
Sbjct: 120 FVEPYSRVAVRKMIATAHADLLASVVQENAFRKITDGLYVQVGARRSGGVLQGIFVAD-- 177

Query: 179 PRDSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSY-------D 231
            RD     V ++  G V E    R  + + DG  +  +P   D  I  FDSY        
Sbjct: 178 ARDPNFELVYYAREGAVDE---ERSALVMKDGEVHRKLPDG-DVSIIKFDSYAFDLTDLT 233

Query: 232 GLIGQREVKSAERDWEALPTLSLLNNADRRA----QAELQWRISLVVCIPLLTMLVVPLS 287
            + G+  +++ +RD   L      + A +RA     AEL  R +     PLL  L+  + 
Sbjct: 234 RMAGEANIRAKDRDLFYLLDPDPDDEAYKRAPLAFTAELHRRFT-EWTFPLLFGLIALVV 292

Query: 288 AVNPRQGRFAKMGP--------AILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALL 339
           + + R  R A++ P         ++ ++T++ A SA  S      +P++  +  +  AL 
Sbjct: 293 SSDARSHREARVHPMVSALGAALVIRWMTFYAANSAEDSV---WFVPLMYLVPLVTGALA 349

Query: 340 LAALMVNTLDSIPV 353
           +  L  N    IP+
Sbjct: 350 IQQLASNRRLDIPM 363