Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., permease YjgP/YjgQ (NCBI) from Rhodospirillum rubrum S1H

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 15/264 (5%)

Query: 5   RYLIRETIKSQFAIFFVLFLVFL----SQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           RY++R  +    A+  V  +V +    S KF+    +     +  +  L +  L MP   
Sbjct: 8   RYILRNLLVG-LAVGSVALIVLIWLINSLKFLDWFVNKG---LSVATFLRLTLLLMPGFL 63

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            + +P++L+  +L T+ RL A+ E+ VM A G+G   L R AL L  +   V  +  L +
Sbjct: 64  TVFIPIALFAVVLFTYNRLAADRELIVMRAAGMGPWQLARPALALCAVLTGVGYWLTLSV 123

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180
            P  +     +  +   E S  ++++G F +  DG  V   +  ++ +L ++ +     +
Sbjct: 124 VPAMEGAFEAIKYEVRGEVSSLVIKEGQFNQMKDGLIVYAGERAKDGRLIDLMIHDTTGK 183

Query: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSY----DGLIGQ 236
            S L   + + SG +    +G +I+ L +G R E            FDSY     G    
Sbjct: 184 TSDL--TVMAESGALVREGEGARIL-LINGNRQERNRQTGKVNFLYFDSYAVDLGGKAAS 240

Query: 237 REVKSAERDWEALPTLSLLNNADR 260
            E++  E     L  L  L   DR
Sbjct: 241 TEMRFREERERPLSELISLKAGDR 264