Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., LPS export ABC transporter permease LptF from Rahnella sp. WP5

 Score =  314 bits (805), Expect = 2e-90
 Identities = 154/359 (42%), Positives = 240/359 (66%)

Query: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           MII+RYL+RET KSQFAI F+L L+F  QK +RVL  A DG+IPT+++LS++GL +P M 
Sbjct: 1   MIIIRYLVRETFKSQFAILFILLLIFFCQKLVRVLGAAVDGDIPTNLVLSLLGLGVPEMA 60

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            L+LPLSL++G+L+T G+LY +SEITVM+A G+G + L+ AAL LAL T+  A  NA+WL
Sbjct: 61  QLILPLSLFLGLLMTLGKLYTDSEITVMHACGLGKRSLVIAALVLALFTSVFAGVNAIWL 120

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIENRKLYNVFVAQLAPR 180
           +PWS   +  ++ +  A  S+  + +G FQ++ +G++V+F+ +++ ++ +NVF+AQL P 
Sbjct: 121 SPWSSKHQDEVLAEAKANPSMAAMVEGQFQQAQNGNAVLFVGSVKGKEFHNVFLAQLRPN 180

Query: 181 DSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQREVK 240
            +  PSV+ +  G + + +DG Q + L  GTRYEG     D+ +T+F  Y  +IG + V+
Sbjct: 181 GNQRPSVVVADKGHMLQRADGSQQVMLDKGTRYEGTALLRDFRVTDFTDYLAVIGHQAVQ 240

Query: 241 SAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFAKMG 300
                 + +    L N+ +  A+AEL WR++L+V + ++ +LVVPLS VNPRQGR   M 
Sbjct: 241 LDPNQSDQMTMTQLWNSNEPEARAELNWRLTLIVSVFIMALLVVPLSVVNPRQGRVLSML 300

Query: 301 PAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMVNTLDSIPVRRFKDR 359
           PAIL+YL +FL  ++ +S    G L  ++ +W  N      AL++N  D++PVR+ + R
Sbjct: 301 PAILLYLIFFLLQTSLRSNGAKGKLDPMLWMWGTNLLYFALALVLNAWDTLPVRKIRAR 359