Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 14/255 (5%)

Query: 12  IKSQFAIFFVLFLVFLSQKF----IRVLADASDGEIPTSMI-LSIVGLNMPAMGLLMLPL 66
           + SQ+ +FF  F + L   F      VL D   G+  ++++ L    L +P +  ++LP+
Sbjct: 8   VLSQYLLFFGFFALILVAVFWINRAVVLFDRLIGDGQSALVFLEFTALALPNLVRMVLPV 67

Query: 67  SLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWLAPWSQD 126
           + +   +    RL +ESE+TV+ ATG     + + A+   LITA + +     L P S  
Sbjct: 68  AAFAASVWVTNRLNSESELTVLRATGTSPWQMAKPAMVFGLITAVMMSILTHVLLPASIA 127

Query: 127 KEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIE-NRKLYNVFVAQLAPRDSILP 185
                  + A   +  LL +G F   P      +I  I+ +  L +VF   L+ R +   
Sbjct: 128 TLEQRESEVARNVTAKLLSEGDFLH-PARGVTFYIGRIDPDGTLNDVF---LSDRRNAAE 183

Query: 186 SVMFSHSGDVKELSDG-RQIITLYDG--TRYEGVPTRVDYMITNFDSYDGLIGQREVKSA 242
           SV ++  G    + DG R  + + DG   R      R+   I +  SYD      + +  
Sbjct: 184 SVTYT-GGKAYLVRDGERTHLVMVDGMSQRINTETQRLSSTIFSDFSYDISSLANKAEEK 242

Query: 243 ERDWEALPTLSLLNN 257
            R+  A+P+L LL +
Sbjct: 243 TRNIRAIPSLELLGD 257