Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., putative permease from Dechlorosoma suillum PS

 Score =  146 bits (368), Expect = 1e-39
 Identities = 94/348 (27%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           MI  R + RE  ++   +F  LF + L+ + IR+L  A+ G++ +  +++++G       
Sbjct: 1   MIFQRAVRREFTQAALGVFIALFAILLTTQLIRLLGQAAAGQVASEAVVALLGFAALNSL 60

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            ++L L+L++ ILLT  R Y +SE+ V  A+G      +R  L   L      A  +L +
Sbjct: 61  PVLLSLTLFMAILLTLSRSYRDSEMVVWFASGQSLTAWVRPVLTFTLPVVVSIALLSLLI 120

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQ--KGHFQRSPDGSSVVFIDNI--ENRKLYNVFVAQ 176
           +PW+    A   ++   +N  D  Q   G F+ +     VVF++ +  ++ ++ N+FV+ 
Sbjct: 121 SPWALKMSAEYRQKLTGQNRDDTAQVSPGAFKEASSSQRVVFVEAVADDSTQVRNIFVSS 180

Query: 177 LAPRDSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQ 236
           +  +      VM + +G  +++ +G + + +  G RYE  P   ++ +  F  Y   +  
Sbjct: 181 MQHQKL---GVMMAATGRSEQMENGDRFMVMEHGRRYEVTPGIPEFRVLEFVRYALRVDT 237

Query: 237 REVKSAERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRF 296
           +E +  E+  +   T  LL N      AE  WR+ + +   +L +L +P+S VNPR GR 
Sbjct: 238 KESQGIEKTPKNTSTRELLKNGSPGYMAEFLWRVGVPLSALVLALLAIPMSFVNPRAGRS 297

Query: 297 AKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALM 344
           A M  A+L +  Y   LS +++ +  G L    G W ++  +L+AAL+
Sbjct: 298 ANMILALLTFTIYSNLLSVSQAWVAQGRLSFSTGWWLVH--VLMAALL 343