Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 380 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 63.9 bits (154), Expect = 7e-15
 Identities = 71/307 (23%), Positives = 127/307 (41%), Gaps = 24/307 (7%)

Query: 56  MPAMGLLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAF 115
           +P   LL++P++  + + LTF R+  + E+  + A G+    ++ A L   ++ A ++  
Sbjct: 50  VPFFMLLVVPVACMLSVFLTFLRMSTDRELVALKAGGVSIYQMMAAPLVFCVLCAGLSLS 109

Query: 116 NALWLAPWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIE--NRKLYNVF 173
            +L    W        + + A   +  ++Q G F +   G ++ F   ++     L  V 
Sbjct: 110 ISLHWLSWGMGNFRATIMEIANTRARIVIQPGVFNQDIPGLTL-FARQVDPATGNLRQVI 168

Query: 174 VAQLAPRDSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSY--- 230
           V   +   S L  V    +    E+  G  +  L DG  Y+     V   +  F  Y   
Sbjct: 169 VEDRSRPGSTLTIVAPEGTTATDEVR-GEILFHLRDGRIYKADGENVS--VLGFSEYSVR 225

Query: 231 ---DGL---IGQREVKSAERDWEALPTLSLLNNAD--------RRAQAELQWRISLVVCI 276
              D L   +   E+K  E  W  L  L L N  +        R+   E+  R +L    
Sbjct: 226 LDLDKLFKGLELGEIKPKEMSWRQLAGLDL-NRYEAEMGERYVRKVLVEVHKRWALPAAC 284

Query: 277 PLLTMLVVPLSAVNPRQGRFAKMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINA 336
            +L +  +PL+       R   +  A++++L Y+  LS   S  E G++P ++GLW  N 
Sbjct: 285 IVLGIFALPLACAFEGLRRQLGVALALVMFLVYYSMLSLGLSTGEAGTVPPVVGLWAPNV 344

Query: 337 ALLLAAL 343
             L+A L
Sbjct: 345 LFLVAGL 351