Pairwise Alignments

Query, 366 a.a., LPS export ABC transporter permease LptF from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., LPS export ABC transporter permease LptF from Ralstonia sp. UNC404CL21Col

 Score =  166 bits (420), Expect = 9e-46
 Identities = 107/348 (30%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 1   MIIVRYLIRETIKSQFAIFFVLFLVFLSQKFIRVLADASDGEIPTSMILSIVGLNMPAMG 60
           MI  + L RE   +  A+F VL    L+   IR+L  A++GE   + +L ++GL      
Sbjct: 1   MIFEQALRRELSFTAGAVFLVLLTFMLTTLVIRILGMAANGEANPNDVLLLIGLATLGYL 60

Query: 61  LLMLPLSLYIGILLTFGRLYAESEITVMNATGIGNKFLIRAALYLALITASVAAFNALWL 120
            ++L  +L+I +LL   R Y +SE+ V   +GI     IR  L  +L    + A  AL+ 
Sbjct: 61  AILLCATLFISVLLVLTRWYKDSEMVVWFTSGISLTDFIRPVLRFSLPFIVLVALLALFG 120

Query: 121 APWSQDKEAHLMEQFAAENSVDLLQKGHFQRSPDGSSVVFIDNIEN--RKLYNVFVAQLA 178
            PW+  + A   ++F   + + ++  G F     G+ V+FI+ ++N  +   N+FVA  A
Sbjct: 121 WPWANQQSALFRDRFEQRDVLSMISAGRFIEPAHGNYVLFIEGVDNGMKHARNLFVAN-A 179

Query: 179 PRDSILPSVMFSHSGDVKELSDGRQIITLYDGTRYEGVPTRVDYMITNFDSYDGLIGQRE 238
            +D I   V  + +G+ K + +G + + L  G RYEG P ++DY I  FD Y   +  + 
Sbjct: 180 EQDKI--GVAMAKTGEFKTMPNGDRFVVLDKGRRYEGTPGKLDYRIVEFDKYGVKVANKP 237

Query: 239 VKS-AERDWEALPTLSLLNNADRRAQAELQWRISLVVCIPLLTMLVVPLSAVNPRQGRFA 297
            ++ A    ++  T  LL N       EL WRI L +      ++ +PL+ VNPR GR+ 
Sbjct: 238 PQADANLPTKSRSTKDLLANPTPENLGELVWRIGLPLLALNFVLIAIPLAYVNPRLGRYT 297

Query: 298 KMGPAILIYLTYFLALSATKSAIEDGSLPVIIGLWPINAALLLAALMV 345
            M  A+LIYLTY   L+ +++ +  G + V +  WPI+    + A+++
Sbjct: 298 PMIFAVLIYLTYSNLLNLSQAWVSQGKMNVFMAWWPIHLVAFICAVLL 345