Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., FIG000906: Predicted Permease from Pseudomonas fluorescens FW300-N2E2

 Score =  256 bits (653), Expect = 8e-73
 Identities = 142/351 (40%), Positives = 213/351 (60%), Gaps = 4/351 (1%)

Query: 5   LDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEM 64
           LD YIG ++      VL   +GL+ +  +++++  V + +Y L     +V+L+ PR +  
Sbjct: 4   LDRYIGSSVFMAILAVLGIILGLATLFAFIDEMSDVSD-TYTLTDVASYVLLTAPRRLYD 62

Query: 65  FFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAP 124
             PMAAL+G LIGLG+LAS+SEL +M+AAG S   I  +V+K  + LM++  L+GE+ AP
Sbjct: 63  MLPMAALIGCLIGLGSLASNSELTIMRAAGVSIGRIVWAVMKPMLVLMLVGVLIGEYIAP 122

Query: 125 QAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVE-NEHLYGLNLWRFDENKKL 183
             +  A+  R+ A  GG   S + G+W R  ++FI I  V+ N  LYG+  +RFD+ + +
Sbjct: 123 ATENTAQANRSLAQGGGDAQSAKHGLWHRQGDEFIHINSVQPNGILYGVTRYRFDDQRHM 182

Query: 184 STVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPE 243
            +  F+++  + A + W + D V T L +D      + P  RW  S++P  L+ V + PE
Sbjct: 183 LSSSFAKRAKF-AEDHWQLID-VTTTLFHDKRTEVVAAPRERWDVSISPQLLSTVVMAPE 240

Query: 244 ELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGA 303
            LS+TGL  Y+HYL     ++ RY LA W KV QP+  A ++LMA+SFIFGPLRSVT+G 
Sbjct: 241 SLSITGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTAALVLMAISFIFGPLRSVTLGQ 300

Query: 304 RILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGR 354
           R+ +GV+ GF+F I+ +  GP SLV+G  PLF  L P+ V     L LL R
Sbjct: 301 RVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGVCALAGLWLLRR 351