Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., LPS export ABC transporter permease LptG from Pseudomonas fluorescens FW300-N2E3

 Score =  248 bits (633), Expect = 2e-70
 Identities = 140/351 (39%), Positives = 210/351 (59%), Gaps = 4/351 (1%)

Query: 5   LDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEM 64
           LD YIG ++      VL   +GL+ +  +++++  V + +Y L   L +V L+ PR V  
Sbjct: 4   LDRYIGGSVFMAILAVLGIILGLATLFAFIDEMSDVTD-TYTLTDVLSYVALTAPRRVYD 62

Query: 65  FFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAP 124
             PMAAL+G LIGLG+LASSSEL +M+AAG S   I  +V+K  + LM+   L+GE+ AP
Sbjct: 63  MLPMAALIGCLIGLGSLASSSELTIMRAAGVSIGRIVWAVMKPMLVLMLAGVLVGEYVAP 122

Query: 125 QAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEH-LYGLNLWRFDENKKL 183
            A+ +A+  R+ A   G   S + G+W R  ++FI I  V+ +  LYG+  +RFD  + +
Sbjct: 123 AAENVAQANRSLAQGIGDAQSAKHGMWHRQGDEFIHINSVQPDGILYGVTRYRFDRERHM 182

Query: 184 STVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKPE 243
            T  FS++  +  ++ W + D V T + +D      + P+ RW   L+P  L  V + PE
Sbjct: 183 LTSSFSKRAQFETDH-WQLND-VTTTVFHDGSTEVVTAPQERWEVPLSPQLLNTVIMAPE 240

Query: 244 ELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMGA 303
            LS++GL  Y+HYL     ++ RY LA W KV QP+    ++LMA+SFIFGPLRSVT+G 
Sbjct: 241 SLSISGLWGYIHYLADQGLNNGRYWLAFWVKVLQPLVTVALVLMAISFIFGPLRSVTLGQ 300

Query: 304 RILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGR 354
           R+ +GV+ GF+F I+ +  GP SLV+G  PLF  L P+ +     L +L R
Sbjct: 301 RVFTGVLVGFTFRIAQDLLGPSSLVFGFSPLFAVLVPAGICGVAGLWMLRR 351