Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  362 bits (930), Expect = e-105
 Identities = 180/352 (51%), Positives = 258/352 (73%), Gaps = 3/352 (0%)

Query: 4   ILDWYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVE 63
           ILDWYI R +++T++L L+   GLSGIIK+V+QLR VG GSY ++ A ++V+  IPRD+E
Sbjct: 3   ILDWYIARVLISTSSLCLLVLTGLSGIIKWVDQLRLVGRGSYTMMDAGVYVLFLIPRDIE 62

Query: 64  MFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGA 123
           MFFPMA LLGALIGLG +A++SELVVMQA+G S+L I +S +KTA+PLM++V  LGEW A
Sbjct: 63  MFFPMAVLLGALIGLGMMAANSELVVMQASGQSRLQITVSAMKTAVPLMLLVMALGEWVA 122

Query: 124 PQAQKMARDMRAFATSGGAIMSVRTGVWARDANDFIFIAKVENEHLYG-LNLWRFDENKK 182
           P A++ A +++A   SGG+++    G+WA+D + F+ I +V + +  G + L+ FD+ ++
Sbjct: 123 PAAEQRANELKATMISGGSLIKSHRGIWAKDGDLFVNIGEVSDINTLGNITLYEFDQQER 182

Query: 183 LSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVVTVKP 242
           L+ V+ + +  +     W M+    T +  +  I +E +    W++SL PDKL+VV+VKP
Sbjct: 183 LNHVVNARRATF-DGKAWQMQGVSKTHITEE-AIVREDIDSELWQSSLTPDKLSVVSVKP 240

Query: 243 EELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRSVTMG 302
           E LS+ GL  Y+ YL+ + QD SRYELALWRK+ QP+++AVMML+ALSF+FGPLRSVTMG
Sbjct: 241 ESLSIQGLMGYLDYLRINSQDPSRYELALWRKLMQPVTVAVMMLVALSFVFGPLRSVTMG 300

Query: 303 ARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLAIALGLLGR 354
           AR+L GV+AGFSFYI +E FGP+++VY LP   GA AP+L+F   A+  + R
Sbjct: 301 ARVLLGVVAGFSFYICNEIFGPMTMVYQLPAFIGAGAPALLFAGAAVFYIRR 352