Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 366 a.a., permease YjgP/YjgQ (NCBI) from Rhodospirillum rubrum S1H

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 97/366 (26%), Positives = 159/366 (43%), Gaps = 22/366 (6%)

Query: 1   MFKILDWYIGRTIVATTALVLVTFV--GLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSI 58
           +++ L  YI RT +  TALV  T V   L  +   +E  R+ G  +  +   L   +  +
Sbjct: 3   IYRTLTTYIARTYL--TALVGATLVVGALLMLFDVIEITRRSGSKAIGIDVVLEMALYHL 60

Query: 59  PRDVEMFFPMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMII-VTL 117
           P  ++   P   + GA++    LA SSELVV++AAG S       V+   + L I  VTL
Sbjct: 61  PMSLQSALPFVFMGGAVMIFWKLARSSELVVIRAAGLSVWQFLAPVIAVVVVLGIANVTL 120

Query: 118 LGEWGAPQAQKMARDMRAFATSGGA--IMSVRTGVWARDAN-------DFIFIAKVENE- 167
           L    A    K  R M A   SG A  +     G+W R+ N           + +V+N  
Sbjct: 121 LNPLAAHLYTKYER-MDAGMDSGVANPLALSDGGLWLRENNPEGQVVMHAQGVRQVDNAL 179

Query: 168 HLYGLNLWRFDENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWR 227
            + G+ ++R+  +++  + I +E          L+  +V+T     +    E+L      
Sbjct: 180 RMTGVTIFRYGPDRRFESRIDAETAG--LREGALVLTSVVTTYPGRVGERAETL---EVP 234

Query: 228 TSLAPDKLAVVTVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLM 287
           ++L   K+      PE +S   L  ++ + +A+   +  + L     +  P+ +  M+LM
Sbjct: 235 SNLTLPKIQDSFSPPETVSFWELPAFITFFEAAGFSAHAHRLHWHSLIASPLLLIAMVLM 294

Query: 288 ALSFIFGP-LRSVTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLVFLA 346
              F   P  RSV    RI+  V AGF  +  S+    L L   LP    A +P+LV   
Sbjct: 295 GAVFSLKPSQRSVNWLFRIVGAVAAGFGVFFFSKITYTLGLSQTLPVNLAAWSPALVTTM 354

Query: 347 IALGLL 352
           +AL  L
Sbjct: 355 VALAAL 360