Pairwise Alignments

Query, 356 a.a., LPS export ABC transporter permease LptG from Vibrio cholerae E7946 ATCC 55056

Subject, 361 a.a., LPS export ABC transporter permease LptG from Rhodopseudomonas palustris CGA009

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 86/345 (24%), Positives = 150/345 (43%), Gaps = 15/345 (4%)

Query: 7   WYIGRTIVATTALVLVTFVGLSGIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFF 66
           ++  R ++A+  +    FV L   + YV+ LR+ G  +             +P+ +E   
Sbjct: 9   YFARRFVIASLGVFFGLFV-LLVFVDYVDLLRRAGGLAVSAFYVAQASFCRVPQLLERLL 67

Query: 67  PMAALLGALIGLGALASSSELVVMQAAGFSKLDIGLSVLKTAIPLMIIVTLLGEWGAPQA 126
           P   L+G +    AL+ S ELVV +AAG S  +     L +AI + I  T +    +   
Sbjct: 68  PFCILIGGMTCYLALSRSLELVVARAAGLSAWEFISPALWSAIAIGIFATTVFNPLSAHM 127

Query: 127 QKMARDMRA--FATSGGAIMSVRTGVWAR----DANDFIFIAKVENEH--LYGLNLWRFD 178
           Q+ A+ M A  F  + G +     G W      D    I  A+ + +   L G+ ++RF+
Sbjct: 128 QERAKQMEAEMFGENTGGLQDAN-GFWMNQVSPDGQAIINAARSQQQGAVLTGITVFRFE 186

Query: 179 ENKKLSTVIFSEQVDYVANNEWLMKDAVLTRLVNDIEISKESLPEYRWRTSLAPDKLAVV 238
            + +    I + +   +    WL+K+ V    ++   + +++L      TSL   ++   
Sbjct: 187 PDFQFKDRIEAREA-VLEPGHWLLKN-VRRYTMDGAPVDQDTL---ELPTSLTLAQVRNS 241

Query: 239 TVKPEELSLTGLSDYVHYLKASEQDSSRYELALWRKVTQPISIAVMMLMALSFIFGPLRS 298
              PE +S   L  Y+   + S   ++ Y L   + + +P  +A M+++A S      R 
Sbjct: 242 FATPESVSFWQLPTYIKSSENSGFATAGYRLQYHKLLAKPFLLAAMVMLAASVSLRFFRF 301

Query: 299 VTMGARILSGVIAGFSFYISSEFFGPLSLVYGLPPLFGALAPSLV 343
             +   +LSGV AGF  YI S+    LS    + PL  A  P  V
Sbjct: 302 GGVQKMVLSGVAAGFLLYILSKVTEDLSKAELMHPLAAAWLPVCV 346