Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., HDIG domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (301), Expect = 8e-32
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 12/380 (3%)

Query: 6   ITVDRLQPGLYIR-LPVKWNEHPFLFNSFKIKSQEQIQLIKHLGIQHVFLNPGLSDSQPL 64
           I V  L  G+Y++ L     E PF    F I+++E ++ +    I   +++         
Sbjct: 5   IGVTDLCVGMYVQELSGSCVERPFWSKGFLIQNEEVLEKVIASDIDGAWIDLSKGVDVQA 64

Query: 65  PPSVEEATPEEALPPVDSEAEKLWQEKQTRIEKLNEYRRRVQTCEKEFERSLARMRAVVN 124
               E     +  P + + +       + R+    E  R V  C      S A +  +  
Sbjct: 65  SAPAETTVQAQQSPRLPTRSCTEVPGPRPRVAMSEELLRAVNLCSS----SKAAVMEMFG 120

Query: 125 KIRNRPLDAVGEAIILVDDIVDKLLSDDNVTLHLMNSKSEFEDIYFHSLNVSVIAMMIGK 184
            +R   +  +     +V +I D LL   +  L L+  K+  E  Y HS  V+V  +MIG 
Sbjct: 121 DLRMGRIVQLDRVTDMVGEISDSLLRHPDALLSLVRLKTADEYTYMHS--VAVCGLMIGL 178

Query: 185 AR--GLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIELADN 242
           AR   LP   ++E   A L HD+GK+ +PTAI+ K  PL + E   +R H + G  +  +
Sbjct: 179 ARQLDLPPLLVQEAGLAGLLHDVGKMVIPTAILAKPLPLNDTEHMTMRTHPEAGARMLAD 238

Query: 243 IETFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFDNLCHPNIPSEQKI 302
              F    + V   HHE  DGSGYP  L G  I   A++ AV + +D +       ++  
Sbjct: 239 SRYFTSRVQDVCLHHHEKVDGSGYPHKLCGTQISLFARMAAVCDVYDAVTSDRPYRDRWG 298

Query: 303 PYVALSHLFKNCKHIYNAENLGILVKFMGVFPPGTVVQLSNDMVGLVISVNASSLLYPNV 362
           P  ++  +     H ++ +     VK +G++P G +V+L +  + +V+  +A  LL P V
Sbjct: 299 PAESIRKMAGWSGH-FDQKVFHAFVKCIGIYPVGALVRLQSGRLAVVMEQHADYLLTPRV 357

Query: 363 LIYDPSVPRSQAP--IIDLA 380
            ++  +  R   P   IDLA
Sbjct: 358 KVFYSASSRVPLPPECIDLA 377