Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2C3

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 12/173 (6%)

Query: 194 KELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIELADNIETFP--ESAK 251
           ++L  AA  ++IGK+     ++   TP      N L L+  Y  +    + T    + A 
Sbjct: 232 RDLTMAAALYNIGKLSWTDNMM--VTPADLLHHNELDLYRSYPKQSESLLMTLDPMKDAA 289

Query: 252 RVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFDNLCHPNIPSEQKIPYVALSHLF 311
           R+I  H E  DGSG+P  LKG+ I   ++++ +A  F  L    I   Q     AL ++ 
Sbjct: 290 RIIRHHQERWDGSGFPEHLKGEAIPFGSRLLKLAVDFIELQRGLILERQMNSDEALVYIR 349

Query: 312 KNCKHIYNAENLGILVKFMGVF--------PPGTVVQLSNDMVGLVISVNASS 356
           K    +Y+ + +   +K  G +        P   V+     + G++++ N ++
Sbjct: 350 KYAGKLYDPDMIEDFIKACGEYLDDVTLSDPTVKVMNTRELVAGMILARNLNA 402