Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., uncharacterized domain HDIG from Pseudomonas stutzeri RCH2

 Score =  117 bits (294), Expect = 5e-31
 Identities = 96/378 (25%), Positives = 180/378 (47%), Gaps = 16/378 (4%)

Query: 5   KITVDRLQPGLYIR-LPVKWNEHPFLFNSFKIKSQEQIQLIKHLGIQHVFLNPGLSDSQP 63
           K+ V +L+ G+Y+  L   W +HPF  + F +     +Q +   GI+ V+++ G      
Sbjct: 4   KVLVSQLRFGMYVHALEGSWFDHPFWRSKFLLTDPADLQALHASGIKAVWIDAGRG---- 59

Query: 64  LPPSVEEATPEEALPPV-DSEAEKLWQEKQTRIEKLNEYRRRVQTCEKEFERSLARMRAV 122
               VE ATP  A  P+  ++   +     T   +    R  +Q      +RS  ++  +
Sbjct: 60  --VDVETATPPAAEAPLLGADTIPVVSISVTPPTQQCSAREEMQRATALLKRSREQVTLL 117

Query: 123 VNKIRNRPLDAVGEAIILVDDIVDKLLSDDNVTLHLMNSKSEFEDIYFHSLNVSVIAMMI 182
            N+ R        +   LV+ I   L  + +  L L   K++ E  Y HS+ V  + + +
Sbjct: 118 FNEARLGKAVDPQQCQPLVEQISASLARNGSALLSLARLKTKDEYTYMHSVAVCALMVAL 177

Query: 183 GKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIELADN 242
            +  GLP +++ E   A L HDIGK+ +P  ++ K   L++ E   +R H + G  +   
Sbjct: 178 ARQLGLPEDQVHEAGMAGLLHDIGKMAMPLDVLNKPGKLSDDEYMVMRSHPERGHAMLLA 237

Query: 243 IET-FPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFDNLCHPNIPSEQK 301
            +T   ++   V   HHE  +G+GYP  L+G+ I  LA++ A+ + +D +   N P   K
Sbjct: 238 AQTAVSDAVLDVCLHHHEKVNGTGYPHRLEGEQISRLARMGAICDVYDAIT-SNRP--YK 294

Query: 302 IPYVALSHLFKNCK--HIYNAENLGILVKFMGVFPPGTVVQLSNDMVGLVISVNASSLLY 359
             + A   L +  +    ++ + L   V+ +G++P G++V+L +  +G+V   +   L  
Sbjct: 295 TAWDASGSLARMAQWHGHFDTQLLHAFVRTVGIYPLGSLVRLQSGRLGVVTEHHPQQLTA 354

Query: 360 PNVLIYDPSVPRSQAPII 377
           P V ++  +  R++A I+
Sbjct: 355 PRVKLFYST--RARAAIV 370