Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 3/142 (2%)

Query: 156 LHLMNSKSEFED--IYFHSLNVSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTA 213
           +H +   +EF D     H + +S    ++ +    PA   +    AA  HDIGK+ +P A
Sbjct: 153 IHKLGRAAEFRDNETGLHIIRMSQYGYLLARKIDQPAHWCQLFLSAAPMHDIGKIGIPDA 212

Query: 214 IVRKKTPLTEPEENYLRLHTKYGIEL-ADNIETFPESAKRVIEQHHELRDGSGYPLGLKG 272
           ++ K   LT  E   ++ H   G ++  D+ +     AK +   HHE  DG+GYP GL  
Sbjct: 213 VLLKPGKLTAEEYIIIQTHPAIGAKIIGDDDDPLLVMAKEIALYHHERWDGTGYPNGLSQ 272

Query: 273 DDIDELAQIVAVANAFDNLCHP 294
           D I   A+I  +A+ FD L  P
Sbjct: 273 DQIPLCARIATIADVFDALTTP 294