Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 175 VSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKK-TPLTEPEENYLRLHT 233
           +S     + KA  LP+E +  +  A LF +IGK+ +PT I     T L   E      H 
Sbjct: 210 ISATCEYLAKALKLPSELVNTVTKAGLFSEIGKIALPTKIAETAYTDLYNRERRLFNEHP 269

Query: 234 KYGIELADNIETFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAF 288
            +  E+    +   E +  +I    E  +G G P    G+DI   ++I+AVA  F
Sbjct: 270 LHAEEILLPAQHLSEMS-LIIANQLERYNGGGEPAQKAGNDIPLGSRILAVARDF 323