Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.5 bits (171), Expect = 9e-17
 Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 6/113 (5%)

Query: 188 LPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIE-LADNIE-- 244
           L  + I++++ +A+ HDIGKV +  AI+ K   LT  E   ++ H   G + LA  +E  
Sbjct: 249 LDEDFIQDISLSAILHDIGKVGIADAILLKPGRLTPEEFEQIKAHPVIGGQVLASLLEYA 308

Query: 245 ---TFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFDNLCHP 294
              TF    + +   HHE  DGSGYPLGLK ++I   A+IVA+ + +D L  P
Sbjct: 309 PRCTFITMGRDIASGHHEKWDGSGYPLGLKEENIPLSARIVALVDVYDALTSP 361