Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 2/144 (1%)

Query: 171 HSLNVSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLR 230
           H + +S  A ++    GLP+   + L  A+  HDIGK+  P A+++K   L   E   ++
Sbjct: 166 HVVRMSHYARLLAIKLGLPSTFCELLYNASPMHDIGKIGTPDAVLKKPGKLDAEEWKIMQ 225

Query: 231 LHTKYGIEL-ADNIETFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFD 289
            H   G E+  ++ +   + A+R+   HHE  DG+GYP GL  ++I    +IVA+A+ FD
Sbjct: 226 QHAVIGAEIIGEHGDPLLQMARRIALTHHEKWDGTGYPNGLSEENIPIEGRIVAIADVFD 285

Query: 290 NLCHPNIPSEQKIPYVALSHLFKN 313
            L     P +Q     A   L +N
Sbjct: 286 ALTSQR-PYKQPWTIEATMELLEN 308