Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 131 LDAVGEAIILVDDIVDKLLSDDNVTLH--LMNSKSEFEDIYF--HSLNVSVIAMMIGKAR 186
           L  +G+ +  +     ++L    V +H  L+    +F   +   HS  V+  A  +G   
Sbjct: 158 LPTLGQHLEAISPCRGEMLDACGVEVHAGLVQGMVDFRSSFTAAHSAGVAEAADALGGYC 217

Query: 187 GLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIELADNIETF 246
            L  ER   L  A L HD+GK+ VPT+I+ K + LT+ E  ++R HT +   L   ++  
Sbjct: 218 DLSPERRVVLRIAGLLHDLGKMAVPTSILEKPSGLTKAEFAFMRQHTFHTYRLLRGVDGL 277

Query: 247 PESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAF 288
              A      HHE  DGSGYP  L+G  +D  A+I+ VA+ F
Sbjct: 278 GGMAAWA-AYHHEKLDGSGYPFHLEGRALDPQARIIGVADIF 318



 Score = 37.7 bits (86), Expect = 6e-07
 Identities = 37/116 (31%), Positives = 50/116 (43%), Gaps = 10/116 (8%)

Query: 175 VSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTK 234
           V+ IA  I     LP    + L  AAL HD+G +        +K  L   +      H  
Sbjct: 1   VAFIAGEIAAVLDLPEVLRRRLFVAALLHDVGALS-----PEEKMDLYASKVEECDTHCI 55

Query: 235 YGIELADNIETFPESAKRVIEQHH-ELRDGSGYPLGLKGDDIDELAQIVAVANAFD 289
            G  L   ++ F E   RV+  HH  LRDGS   L    +D   LAQIV +++  D
Sbjct: 56  RGARLLHQVDGFGEEG-RVLRLHHATLRDGS---LADVDEDTARLAQIVHLSDLVD 107