Pairwise Alignments

Query, 417 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 135 GEAIILVDDIVDK--LLSDDNVTLHLMNSKSEFEDIYFHSLNVSVIAMMIGKARGLPAER 192
           G    L ++I+D   ++S  N+   +++S+S F     HS  V+  A ++    GL  + 
Sbjct: 194 GPGARLEEEILDTEGVISFSNLFSLVIDSRSPFTAT--HSSGVAETARLLAMRAGLGHDV 251

Query: 193 IKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLRLHTKYGIELADNIETFPESAKR 252
            +++  A L HDIGK+ VP +I+ K  PL   E   ++LH      + D +  F E   R
Sbjct: 252 AQKVFVAGLLHDIGKLGVPLSILEKPGPLDAAEMCEMQLHAGRSKTILDAVPGFDE-VSR 310

Query: 253 VIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAF 288
               HHE  DGSGYP GL+GD+++  ++I+AVA+ F
Sbjct: 311 WGALHHERLDGSGYPFGLRGDELEVPSRIIAVADVF 346



 Score = 34.7 bits (78), Expect = 6e-06
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 14/121 (11%)

Query: 171 HSLNVSVIAMMIGKARGLPAERIKELAFAALFHDIGKVRVPTAIVRKKTPLTEPEENYLR 230
           H ++V   A  +G+  GL A    EL  +AL HD+G + + T +           E    
Sbjct: 28  HHIHVGYFAARLGERLGLDARDRCELLLSALLHDVGAISLKTGLDGLLF------EQNAD 81

Query: 231 LHTKYGIELADNIETFPESAKRVIEQHHELRDGSGYPLGLKGDDIDELAQIVAVANAFDN 290
            H + G  L         + + V+  H    D          DD+D   ++ A+ +  D 
Sbjct: 82  AHARAGWALIGTCPRLAAAGEVVLHHHAAWED--------VADDLDRAKRLGAIVHLADR 133

Query: 291 L 291
           L
Sbjct: 134 L 134