Pairwise Alignments

Query, 200 a.a., 3-isopropylmalate dehydratase small subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) from Pseudomonas fluorescens FW300-N2E2

 Score =  239 bits (610), Expect = 3e-68
 Identities = 120/202 (59%), Positives = 146/202 (72%), Gaps = 8/202 (3%)

Query: 1   MSGFQQHTGLVVPLDAANVDTDAIIPKQFLQKVNRTGFGKHLFHDWRFLD-------DAG 53
           M  F QHTGLV PLD ANVDTD IIPKQFL+ + RTGFG +LF +WR+LD       ++ 
Sbjct: 1   MKAFTQHTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPYQDNSK 60

Query: 54  EKANPEFVMNQPRYQDASILLARENFGCGSSREHAPWALADYGIRVMIAPSFADIFYGNS 113
              N +FV+N  RYQ AS+LLARENFGCGSSREHAPWAL +YG R +IAPS+ADIF+ NS
Sbjct: 61  RPVNKDFVLNAERYQGASVLLARENFGCGSSREHAPWALEEYGFRSIIAPSYADIFFNNS 120

Query: 114 INNQMVPVRLTEQEVDELFTYVHDTEGATITVDLEALSVT-ANGKTYHFEIDDFRRHCLL 172
             N ++P+ L++ EVDELF  V    G  + +DL A +VT  +GK   FEID FR+HCLL
Sbjct: 121 FKNGLLPIILSDAEVDELFQQVEANPGYQLQIDLAAQTVTRPDGKVLGFEIDAFRKHCLL 180

Query: 173 NGLDNIGLTLQHEAKIAEYEAK 194
           NGLD+IGLTLQ    IA +EAK
Sbjct: 181 NGLDDIGLTLQDGEAIAAFEAK 202