Pairwise Alignments

Query, 467 a.a., 3-isopropylmalate dehydratase large subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., 3-isopropylmalate dehydratase, large subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  471 bits (1211), Expect = e-137
 Identities = 241/465 (51%), Positives = 311/465 (66%), Gaps = 10/465 (2%)

Query: 1   MSKAKTLYEKIYDAHVVVAAPGETPILYIDRHLVHEVTSPQAFDGLREKGRPVRQVSKTF 60
           MS  +TL EK++ AH V        +L++DRHL+HE  S  AF  L E+G  V   ++TF
Sbjct: 1   MSTPRTLLEKLWAAHEVTRREDGASLLWVDRHLLHE-GSHHAFAKLAERGLSVAAPAQTF 59

Query: 61  ATMDHNVSTTTKDINASGEMARIQMQTLSKNCEEFGVTLYDINHKYQGIVHVMGPELGIT 120
           A MDH   T  +    +    R  +  L +N E   + L+D+  + QGIVHV+GPE G+T
Sbjct: 60  AVMDHYAPTRDRAAEGATPEIRAMIARLRENAEIHQIRLFDLFDRDQGIVHVIGPEQGLT 119

Query: 121 LPGMTIVCGDSHTATHGAFGSLAFGIGTSEVEHVLATQTLKQGRAKTMKIEVRGKVAPGI 180
           LPG+TI CGDSHT+THGAFG+LAFGIG +EV HVLATQT+ Q R KT+++   G++ PG+
Sbjct: 120 LPGLTINCGDSHTSTHGAFGALAFGIGATEVAHVLATQTVWQTRPKTLRLRFDGRLGPGV 179

Query: 181 TAKDIVLAIIGKTTAAGGTGYVVEFCGEAIRDLSMEGRMTVCNMAIELGAKAGLIAPDAT 240
            AKD+ LA I    + G  G+ +E+ GEA+R LSMEGRMT+CN++IE GAK GLIAPD T
Sbjct: 180 GAKDLALAWIAALGSDGARGHAIEYTGEAVRRLSMEGRMTLCNLSIEGGAKLGLIAPDET 239

Query: 241 TFNYIKGRKFAPQGSDWDAAVDYWQTLKTDEDAQFDAVVTLEASEIKPQVTWGTNPGQVI 300
           TF Y++GR  AP G+DW  AV+ W  L++DEDA FD   TL+ + I P VTWGT P Q I
Sbjct: 240 TFAYLRGRPHAPDGADWGRAVEDWAALRSDEDAVFDREETLDCAAIAPVVTWGTRPDQAI 299

Query: 301 AVDEPIPSPSQFADPVERSSAEKALAYMGLEAGKMLSDYKVDKVFVGSCTNSRIEDMRAA 360
            V E +P         E S    AL YMGL AG  ++   VD+VF+GSCTN RIED+RAA
Sbjct: 300 PVTENLPRG-------EGSEVNSALTYMGLRAGAPIAGTPVDQVFIGSCTNGRIEDLRAA 352

Query: 361 AAVAKGKKVASHVQALIVPGSEQVKAQAEAEGLDKIFIEAGFEWRLPGCSMCLAMNNDRL 420
           AAV  G++  + V   + PGS ++KAQAE EGL +IFI AG EW   GC+MC+ MN D +
Sbjct: 353 AAVLAGRR--ARVPGQVTPGSARIKAQAEQEGLAEIFIAAGLEWTEAGCAMCVGMNGDLV 410

Query: 421 GPGERCASTSNRNFEGRQGRDGRTHLVSPAMAAAAAIAGHFVDIR 465
            PG+RCAS++NRNF GRQG   RTHL+SPAM AAAA+ G   D+R
Sbjct: 411 APGKRCASSTNRNFRGRQGPGARTHLMSPAMVAAAAVTGEITDVR 455