Pairwise Alignments

Query, 363 a.a., 3-isopropylmalate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  190 bits (483), Expect = 4e-53
 Identities = 129/339 (38%), Positives = 182/339 (53%), Gaps = 26/339 (7%)

Query: 8   IAVLPGDGIGPEVMAQAHKVLDAIEQKHGIRFSREEHDVGGIAIDNHGCPLPESTLRACE 67
           I V+PGDGIGP ++  A K+LD    K G  F  E  D G  A++  G  LP+ TL   E
Sbjct: 6   ITVIPGDGIGPSIIDSALKILD----KAGCDFEYEFADAGLAALEKQGELLPQRTLELIE 61

Query: 68  EADAVLFGSVGGPKWEHLPPNEQPERGALLPLRKHFQLFCNLRPAQIHQGLEAFSPLRAD 127
           +    L G +  P  E             + LRK F L+ N+RP    +G +A       
Sbjct: 62  KNRITLKGPLTTPVGEGFTSIN-------VTLRKKFGLYANVRPVLSFKGTQA------- 107

Query: 128 ISARGFDIVVVRELTGGIYFGQPKGREGEGAHEKAFDTEVYHRFEIERIARIAFESARLR 187
                 DI+ VRE T G+Y G  +    +G+  +A  T +  R   E+IA  A+E AR  
Sbjct: 108 -RYENIDIITVRENTEGMYSGHGQKVSEDGSTAEA--TSIVTRQGAEQIATFAYELARKE 164

Query: 188 -RKKVCSIDKANVLQS-SILWREVVSEIAKEYPDVSLSHMYIDNATMQLIKDPAQFDVML 245
            RKKV  + KAN+++S S L+ +V  E++  YPD+    M +D   M+L+ +P  FDV++
Sbjct: 165 SRKKVTIVHKANIMKSTSGLFLKVAREVSLRYPDIKTEEMIVDATCMKLVMNPENFDVIV 224

Query: 246 CSNIFGDILSDECAMITGSMGMLPSASMNESKFGLYEPAGGSAPDIAGKNIANPVAQILS 305
            +N+FGDILSD CA + G +GM P A++      ++E   GSAPDIAGKN+ANP + IL+
Sbjct: 225 TTNLFGDILSDLCAGLVGGLGMAPGANIGRDA-AIFEAVHGSAPDIAGKNLANPTSVILA 283

Query: 306 AALMLRYSLGEEAAARDIENAVSQALAAGE-LTADLAGS 343
           +  ML Y LG    A  I  AVS  +  G+  T DL G+
Sbjct: 284 SIQMLEY-LGMADKAAPIRKAVSAVIEEGDRTTRDLGGT 321