Pairwise Alignments

Query, 363 a.a., 3-isopropylmalate dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., 3-isopropylmalate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  285 bits (728), Expect = 2e-81
 Identities = 168/358 (46%), Positives = 226/358 (63%), Gaps = 11/358 (3%)

Query: 5   DYKIAVLPGDGIGPEVMAQAHKVLDAIEQKHGIRFSREEHDVGGIAIDNHGCPLPESTLR 64
           D+KIAVL GDGIGPE+  Q   V+ A+ +K G + S E    G  AID  G P PE T  
Sbjct: 2   DFKIAVLAGDGIGPEISVQGVDVMSAVCEKFGHKVSYEYAICGADAIDKVGDPFPEETYE 61

Query: 65  ACEEADAVLFGSVGGPKWEHLPPNE-QPERGALLPLRKHFQLFCNLRPAQIHQGLEAFSP 123
            C+ ADAVLF +VG PK+++ P  + +PE+G LL +RK   LF N+RP Q  + L   SP
Sbjct: 62  VCKNADAVLFSAVGDPKFDNDPTAKVRPEQG-LLAMRKKLGLFANIRPVQTFKCLIHKSP 120

Query: 124 LRADISARGFDIVVVRELTGGIYFGQPKGREGEGAHEKAFDTEVYHRFEIERIARIAFES 183
           LRA++     D + +RELTGG+YFG     E    ++KA+DT  Y R EIERI ++AFE 
Sbjct: 121 LRAEL-VENADFICIRELTGGMYFG-----EKYQDNDKAYDTNYYTRPEIERILKVAFEY 174

Query: 184 ARLRRKKVCSIDKANVLQSSILWREVVSEIAKEYPDVSLSHMYIDNATMQLIKDPAQFDV 243
           A  RRK +  +DKANVL SS LWR++  E+A  YP+V+  +M++DNA M++I++PA FDV
Sbjct: 175 AMKRRKHLTVVDKANVLASSRLWRQIAQEMAPNYPEVTTDYMFVDNAAMKMIQEPAFFDV 234

Query: 244 MLCSNIFGDILSDECAMITGSMGMLPSASMNESKFGLYEPAGGSAPDIAGKNIANPVAQI 303
           M+  N FGDIL+DE ++I+GSMG+LPSAS  ES   ++EP  GS P   G NIANP+AQI
Sbjct: 235 MVTENTFGDILTDEGSVISGSMGLLPSASTGEST-PVFEPIHGSWPQAKGLNIANPLAQI 293

Query: 304 LSAALMLRYSLGEEAAARDIENAVSQALAAGELTADLAGSKPA-LSTSAMGDKIASYI 360
           LS A++  Y   +E  A  I  AV  +L     T ++  +  A   T  +G  I  YI
Sbjct: 294 LSVAMLFEYFDCKEEGAL-IRKAVDASLDENVRTPEIQVADGAKYGTKEVGQWIVDYI 350