Pairwise Alignments

Query, 516 a.a., 2-isopropylmalate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., 2-isopropylmalate synthase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  392 bits (1006), Expect = e-113
 Identities = 220/497 (44%), Positives = 300/497 (60%), Gaps = 2/497 (0%)

Query: 3   NQVIIFDTTLRDGEQALSASLTVKEKLQIAYALERLGVDIIEAGFPVSSPGDFESVQTIA 62
           ++V+IFDTTLRDGEQ+  A++T  EKL+IA  L+ +GVDIIEAGFP++S GDF +V  IA
Sbjct: 8   DRVLIFDTTLRDGEQSPGATMTHDEKLEIAALLDEMGVDIIEAGFPIASDGDFAAVSEIA 67

Query: 63  KNIKNSRVCALSRAVAKDIDAAAEALKVAEAFRIHTFISTSTIHVQDKLRRSYDDVVAMA 122
           KN  NS +C L+RA  KDID   EA++ A   RIHTFI TS +H +     + D++    
Sbjct: 68  KNSVNSVICGLARANFKDIDRCWEAVRHARQPRIHTFIGTSPLH-RAIPNLTMDEMADRI 126

Query: 123 VKAVKHARQYTDDVEFSCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYTVPSEFGG 182
              V HAR   D+V++S  DA RT  D LCR++E AI AGA TINIPDTVGYT P E   
Sbjct: 127 HDTVTHARNLCDNVQWSPMDATRTEYDYLCRVIEIAIKAGATTINIPDTVGYTAPRESAD 186

Query: 183 IIQTLFNRVPNIDKAIISVHCHDDLGMSVANSIAAIQAGARQVEGTINGIGERAGNCALE 242
           +I  L   VP  +    + HCH+DLGM+ AN++AA+ AGARQVE TING+GERAGN ALE
Sbjct: 187 LIARLIADVPGAEDVTFATHCHNDLGMATANALAAVDAGARQVECTINGLGERAGNTALE 246

Query: 243 EIAMIIKTRQELLGVTTGIKHDEISRTSKLVSQLCNMPIQSNKAIVGANAFSHSSGIHQD 302
           E+ M ++ R +++   T I   +I   S+ V+ +    +Q NKAIVG NAF+H SGIHQD
Sbjct: 247 EVVMALRVRNDIMPYQTRIDTRKIMNISRRVAAVSGFAVQFNKAIVGKNAFAHESGIHQD 306

Query: 303 GMLKNKNTYEIMTPESIGLKNQALNLTSRSGRAAVKSHMDSMGYNENEYNLDALYEDFLK 362
           GMLKN  T+EIM PE IGL    L +   SGRAA+++ +  +GY   +  L  ++  F  
Sbjct: 307 GMLKNAETFEIMRPEDIGLSETNLVMGKHSGRAALRAKLKDLGYELADNQLKDVFVRFKA 366

Query: 363 LADRKGQVFDYDLEALMHFSNLREEDDFYKLNYLSVQSGS-VMATTSIKLLCGGEEKCEA 421
           LADRK +++D DL ALM  S+     +   + +L V  G+    +  + L   G +K   
Sbjct: 367 LADRKKEIYDEDLVALMSESSSDPARERLSVKFLRVICGTEAPQSADLTLSIDGVDKQVT 426

Query: 422 AVGNGPVDALYQCIYRITGYEIVLDKFDLTAKGEGEDGLGQADIIANYKGRKYHGTGVST 481
           A G+GPVDA +  +  +  +   L  + + A  EG D      +     GR   G    T
Sbjct: 427 AQGDGPVDATFNAVKALFPHTARLQLYQVHAVTEGTDAQATVTVRMEEDGRIVSGQAADT 486

Query: 482 DIVEASGQALLHVINSI 498
           D V AS +A +  +N +
Sbjct: 487 DTVVASAKAYVAALNRL 503