Pairwise Alignments

Query, 321 a.a., transcriptional regulator LeuO from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., NodD1 nod-box dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 6e-28
 Identities = 81/293 (27%), Positives = 131/293 (44%), Gaps = 5/293 (1%)

Query: 23  RGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQPT 82
           RG+DLNLL   DA+M E+ +T AA  + +SQPA+S A+ARL+  F DELF  QGR + PT
Sbjct: 4   RGLDLNLLVALDALMTERKLTAAARRINLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63

Query: 83  QRARQLFGPIRQALQLIR-NELPSSVFTPETSTRLFKLAICSPCDLRFAPQIMASIDELA 141
            RA  L   +R AL  I+ + +      P  S R F++ +     L F  +I+  +   A
Sbjct: 64  PRAEALAPAVRDALLHIQLSVIAWDPLNPAQSDRRFRIILSDFMILVFFARIVERVAREA 123

Query: 142 PSVQLHLDAEFDRQIAERMRYQEIDFVIDYARFDDQGFSSTEIFQDELVVVASKLHPHIQ 201
           P V   L    D    E +R  ++DF+I    F        ++F + LV V    +  + 
Sbjct: 124 PGVSFEL-LPLDDDPHELLRRGDVDFLIFPDVFMSSAHPKAKLFDEALVCVGCPTNKKLL 182

Query: 202 GSITAEQLSAEKHAKLSKVHGQRSFSE---LAYRDFDCQSYYEGTSLSNVLYVVGQSELV 258
           G+I+ E   +  H         +   E   L    F+ +        + +  ++  +  +
Sbjct: 183 GNISFETYMSMGHVAAQFGREMKPSVEQWLLLEHGFNRRIELVVPGFTLIPRLLSGTNRI 242

Query: 259 TVAPRWMAENAANRDELQILAFPFAESKISGYLSWHESSEKDKGHIWLRDQLM 311
              P  + +       L+I+  P      +  + W      D G+IWLR+ L+
Sbjct: 243 ATLPLRLVKYFEQTIPLRIVTSPLPPLFFTEAIQWPALHNTDPGNIWLREILL 295