Pairwise Alignments

Query, 321 a.a., transcriptional regulator LeuO from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  111 bits (278), Expect = 2e-29
 Identities = 86/314 (27%), Positives = 142/314 (45%), Gaps = 27/314 (8%)

Query: 23  RGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQPT 82
           +G+DLNLL   DA+M ++++T AA ++ +SQPA+S+A+ARL+  F DELF  QGR +  T
Sbjct: 4   KGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITT 63

Query: 83  QRARQLFGPIRQALQLIRNELPS-SVFTPETSTRLFKLAICSPCDLRFAPQIMASIDELA 141
            RA  L   IR AL  I+  + S  +F P  S R F++ +     L F  +++  +   A
Sbjct: 64  PRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREA 123

Query: 142 PSVQLHLDAEFDRQIAERMRYQEIDFVIDYARFDDQGFSSTEIFQDELVVVASKLHPHIQ 201
           P V   L    D    E +R  E+DF+I    F        ++F   LV V    +  + 
Sbjct: 124 PGVSFELLPPDDNP-DELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLL 182

Query: 202 GSITAEQLSAEKHAK--------------LSKVHGQRSFSELAYRDFDCQSYYEGTSLSN 247
           G ++ E+  +  H                L   HG +   EL    F+            
Sbjct: 183 GDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNL----------- 231

Query: 248 VLYVVGQSELVTVAPRWMAENAANRDELQILAFPFAESKISGYLSWHESSEKDKGHIWLR 307
           +  ++  ++ + + P  +A + A    L+I+  P      +  + W     KD+  IW+R
Sbjct: 232 IPPLLSGTKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMR 291

Query: 308 DQLMVICGEVVANR 321
           + L+     + A R
Sbjct: 292 EILLDEAARIAAPR 305