Pairwise Alignments

Query, 321 a.a., transcriptional regulator LeuO from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 5e-28
 Identities = 83/298 (27%), Positives = 136/298 (45%), Gaps = 15/298 (5%)

Query: 23  RGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQPT 82
           RG+DLNLL   DA+M E+ +T AA  + +SQPA+S A+ARL+  F DELF  QGR + PT
Sbjct: 4   RGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63

Query: 83  QRARQLFGPIRQALQLIR-NELPSSVFTPETSTRLFKLAICSPCDLRFAPQIMASIDELA 141
            RA  L   +R AL  I+ + +      P  S R F++ +     L F  +++  +   A
Sbjct: 64  PRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREA 123

Query: 142 PSVQLHLDAEFDRQIAERMRYQEIDFVIDYARFDDQGFSSTEIFQDELVVVASKLHPHIQ 201
           P V   L    D    E +R  ++DF++    F        ++F + LV V    +  + 
Sbjct: 124 PGVSFEL-LPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQLL 182

Query: 202 GSITAEQLSAEKHAKLSKVHGQ------RSFSE--LAYRDFDCQSYYEGTSLSNVLYVVG 253
           G     +LS EK+  +  V  Q       SF +  L    F  +        + +  ++ 
Sbjct: 183 G-----ELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLP 237

Query: 254 QSELVTVAPRWMAENAANRDELQILAFPFAESKISGYLSWHESSEKDKGHIWLRDQLM 311
            +  + + P  + +       L+I+  P      +  + W     KD G+IW+R+ L+
Sbjct: 238 HTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILL 295