Pairwise Alignments

Query, 321 a.a., transcriptional regulator LeuO from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  125 bits (313), Expect = 2e-33
 Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 15/294 (5%)

Query: 22  LRGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQP 81
           L+ VDLNL  VFDA+  E+N+TRAA  L ++QPAVSNA++RL+   ND LF+R  + + P
Sbjct: 3   LQNVDLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMMP 62

Query: 82  TQRARQLFGPIRQALQLIRNELP-SSVFTPETSTRLFKLAICSPCDLRFAPQIMASIDEL 140
           T  A  + G +R+AL+L+ + +     F P  +   F+L +    +    P ++A++   
Sbjct: 63  TPVAENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQVH 122

Query: 141 APSVQLHLDAEFDRQIAERMRYQEIDFVIDYARFDDQGFSSTEIFQDELVVVASKLHPHI 200
           AP + +        ++ +      +D  ID             +     V +  K HP +
Sbjct: 123 APRLSISSYPVSREEMLKEFVSGRLDLAIDAPIVTHPDLYHHPLVTVPYVCLVRKDHPEV 182

Query: 201 QGSITAEQLSAEKHAKLSKVHGQRSFSELA------YRDFDCQSYYEGTSLSNVLYVVGQ 254
             +++ EQ  A  H  +S       + + A      +R+   ++ +   +      +V +
Sbjct: 183 GDTLSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPK----LVAE 238

Query: 255 SELVTVAPRWMAENAANRDELQILAFPFAESKISGYLSWHESSEKDKGHIWLRD 308
           + L T  P  +A+N     +L++L  PF    I  +L WH S+++D  + WLR+
Sbjct: 239 TNLATTVPESLAKNT----DLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLRE 288